DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATG16L2 and atg16l2

DIOPT Version :10

Sequence 1:NP_203746.1 Gene:ATG16L2 / 89849 HGNCID:25464 Length:619 Species:Homo sapiens
Sequence 2:NP_001428389.1 Gene:atg16l2 / 100034627 ZFINID:ZDB-GENE-060503-197 Length:590 Species:Danio rerio


Alignment Length:609 Identity:257/609 - (42%)
Similarity:379/609 - (62%) Gaps:43/609 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    14 WKRHIVRQLRLRDRTQKALFLELVPAYNHLLEKAELLDKFSKKLQPEPNSVTPTTHQGPWEESEL 78
            |||||:|||:.|:|||.:||.:::.:|:.||||::.....:|.:....:..:|.    |..|..|
Zfish    18 WKRHIIRQLKNRNRTQTSLFQDIIQSYHSLLEKSKQRALITKGILGSGSRTSPV----PSSEDSL 78

Human    79 DSDQVPSLVALRVKWQEEEEGLRLVCGEMAYQVVEKGAALGTLESELQQRQSRLAALEARVAQLR 143
            .|                   |:...||:||||||....:...|..|.::.::|..::..::.:.
Zfish    79 AS-------------------LKTTTGELAYQVVELQQRVQMKEVTLDEQHNKLFEVQNHLSIMA 124

Human   144 EARAQQAQQVEEWRAQNAVQRAAYEALRAHVGLREAALRRLQEEARDLLERLVQRKARAAAERNL 208
            ...::..::|.|.:..|.:.:..|::|.......|...|:.:..:.|:||.:::.|.:|||..|.
Zfish   125 SEHSELQERVTEVQTGNRLLKQKYDSLLEQHQNMEKTYRQEKLHSADILENMIRPKQQAAARMNH 189

Human   209 RNERRERAKQARVSQELKKAAKRTVSISEGPDTLGDGMRERRETLALAPEPEPLEKEACEKWKRP 273
            |||:|.||::|.:.:||::||.:.|:|:|....:.            .|.|...:.|..|:.:|.
Zfish   190 RNEKRVRAREASIHKELQEAANKNVNINEESGNVS------------PPNPSSPQCETAERLERS 242

Human   274 ----FRSASATSLTLSHCVDVVKGLLDFKKRRGHSIGGAPEQRYQIIPVCVAARLPTRAQDVLDA 334
                ||||||||   ...:..::||.: :|.||.|:..:.|..|..:.||:.||:||:|...|||
Zfish   243 HGPLFRSASATS---PRIISSIRGLFE-RKIRGKSVCRSEEDLYIPLGVCLVARVPTKAISSLDA 303

Human   335 HLSEVNAVRFGPNSSLLATGGADRLIHLWNVVGSRLEANQTLEGAGGSITSVDFDPSGYQVLAAT 399
            |...:|||||..:::||||||.||:|.||::....|:...||:|:...|||::|||:|.::|||:
Zfish   304 HDLGINAVRFSTSTNLLATGGTDRVIKLWDIEAGTLQYRGTLDGSNEGITSIEFDPTGTRILAAS 368

Human   400 YNQAAQLWKVGEAQSKETLSGHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLS 464
            |:::|..|::.::..|.||:||..|||||:||.::.|.||||.|||||.|||.||.|.:||.|||
Zfish   369 YDKSALFWRLEDSVPKVTLTGHSRKVTAARFKYSQRQVVTGSADRTVKIWDLQRAACIQTIEVLS 433

Human   465 YCNDVVCGDHIIISGHNDQKIRFWDSRGPHCTQVIPVQGRVTSLSLSHDQLHLLSCSRDNTLKVI 529
            :|:||||.:::|||.|.|:||||||||...|||.:|:|||||||.|..:...||||||||.|:::
Zfish   434 FCSDVVCSEYLIISSHYDKKIRFWDSRAATCTQEVPLQGRVTSLDLCPNHRQLLSCSRDNILQLV 498

Human   530 DLRVSNIRQVFRADGFKCGSDWTKAVFSPDRSYALAGSCDGALYIWDVDTGKLESRLQGPHCAAV 594
            |||.||.|..|||:|||||||.|||:||||.|:..|||.|||:|||:|:||.||..|...|.|.:
Zfish   499 DLRKSNDRVAFRAEGFKCGSDSTKAIFSPDGSFLAAGSADGAVYIWNVNTGNLEKHLPDMHSAPI 563

Human   595 NAVAWCYSGSHMVSVDQGRKVVLW 618
            :|:||..||.::||||:.|:.|||
Zfish   564 SALAWSLSGEYVVSVDKSRRAVLW 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATG16L2NP_203746.1 WD40 repeat 505..543 CDD:293791 22/37 (59%)
WD 6. /evidence=ECO:0000255 546..585 27/38 (71%)
WD40 repeat 551..587 CDD:293791 22/35 (63%)
WD 7. /evidence=ECO:0000255 589..619 15/30 (50%)
ATG16 32..203 CDD:462536 36/170 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 57..78 3/20 (15%)
SMC_N <121..>295 CDD:481474 46/177 (26%)
WD40 331..619 CDD:238121 163/288 (57%)
WD 1. /evidence=ECO:0000255 334..373 19/38 (50%)
WD40 repeat 341..378 CDD:293791 18/36 (50%)
WD 2. /evidence=ECO:0000255 378..417 15/38 (39%)
WD40 repeat 384..420 CDD:293791 15/35 (43%)
WD 3. /evidence=ECO:0000255 420..454 22/33 (67%)
WD40 repeat 425..461 CDD:293791 23/35 (66%)
WD 4. /evidence=ECO:0000255 455..498 26/42 (62%)
WD40 repeat 467..499 CDD:293791 20/31 (65%)
WD 5. /evidence=ECO:0000255 500..539 24/38 (63%)
atg16l2NP_001428389.1 None

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