DRSC/TRiP Functional Genomics Resources

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Protein Alignment P4HA2 and PH4alphaPV

DIOPT Version :9

Sequence 1:NP_001136071.1 Gene:P4HA2 / 8974 HGNCID:8547 Length:535 Species:Homo sapiens
Sequence 2:NP_733395.1 Gene:PH4alphaPV / 43640 FlyBaseID:FBgn0051015 Length:525 Species:Drosophila melanogaster


Alignment Length:511 Identity:169/511 - (33%)
Similarity:277/511 - (54%) Gaps:30/511 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    25 TSIGHMTDLIYAEKELVQSLKEYILVEEAKLSKIKSWANKMEALTSKSAADAEGYLAHPVNAYKL 89
            ||:..|..|:..|.:|:.:|::|.:..|.||..::.....:.....|:.:..|.||::|:|::.|
  Fly    34 TSVAGMVKLLDLEAQLIDNLEDYAVELEKKLQTVRRSITSLRLENDKARSSTEEYLSNPLNSFSL 98

Human    90 VKRLNTDWPALEDLVLQDSAAGF--IANLSVQRQFFPTDEDEIGAAKALMRLQDTYRLDPGTISR 152
            ::|:|.||...:  :..|...|.  :..:...|:..||..|...|..||.|:|.||.|....||.
  Fly    99 IRRMNRDWIIWQ--LYMDDPVGISQVERIQELREHMPTHTDVEEAVTALDRIQSTYGLKVPEISH 161

Human   153 GELPGTKYQAMLSVDDCFGMGRSAYNEGDYYHTVLWMEQVLKQLDAGEEAT---TTKSQVLDYLS 214
            |.|.|.:|...|:|.|.:.||:..:::.:|.....|:.|.:..::|...|.   .:|::|....:
  Fly   162 GFLNGKQYNVSLTVLDTYAMGQILFDQKNYLAAASWIYQSVVLMEAFSMAAPLEISKNEVRMVYA 226

Human   215 YAVFQLGDLHRALELTRRLLSLDPSHERAGGNLRYFEQLLEEEREKTLTNQTEAELATPEGIYER 279
            ..:.:|.....||::....|:.:| |:        .:.||::...:|:. :|....|.|..:...
  Fly   227 ETLLKLNQHADALKVVNIALTDNP-HD--------IKLLLKKSEIETMI-RTGTNNAPPVKVQAT 281

Human   280 PVDYLPERDVYESLCRGEGVKLTPRRQKRLFCRYHHGNRAPQLLIAPFKEEDEWDSPHIVRYYDV 344
            .|.     ..|:..|||:   ..|....:|:|.|:. ..:|.|::||.|.|.....|::|.|:||
  Fly   282 GVP-----TAYQIGCRGQ---FPPSADSKLYCLYNR-TTSPFLILAPLKMELVGLDPYMVLYHDV 337

Human   345 MSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLT 409
            :|.:||:.::.:|.|.|.||||....:|...|...|.||.:|..:..:|:..|:|.|:..:||..
  Fly   338 LSPKEIKELQGMATPGLKRATVYQASSGRNEVVKTRTSKVAWFPDGYNPLTVRLNARISDMTGFN 402

Human   410 VKTAELLQVANYGVGGQYEPHFD-FSRNDERDTFKHLGTGNRVATFLNYMSDVEAGGATVFPDLG 473
            :..:|:||:.|||:||.|:.|:| |::.:...|..   :|:|:||.|.|::|||.|||||||::.
  Fly   403 LYGSEMLQLMNYGLGGHYDQHYDFFNKTNSNMTAM---SGDRIATVLFYLTDVEQGGATVFPNIR 464

Human   474 AAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGQEFLRPC 529
            .|::|::|:.|.||||..:|:.|.:|.||||||:||.|||.|||..||.|.|.|||
  Fly   465 KAVFPQRGSVVMWYNLKDNGQIDTQTLHAACPVIVGSKWVCNKWIREREQIFSRPC 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P4HA2NP_001136071.1 P4Ha_N 26..155 CDD:311993 38/130 (29%)
TPR 207..240 6/32 (19%)
P4Hc 346..519 CDD:214780 76/173 (44%)
PH4alphaPVNP_733395.1 P4Ha_N 35..164 CDD:285528 38/130 (29%)
TPR_11 179..250 CDD:290150 13/70 (19%)
TPR repeat 179..213 CDD:276809 7/33 (21%)
TPR repeat 218..248 CDD:276809 6/29 (21%)
P4Hc 339..510 CDD:214780 76/173 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100878
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.920

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