DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment P4HA2 and CG11828

DIOPT Version :9

Sequence 1:NP_001136071.1 Gene:P4HA2 / 8974 HGNCID:8547 Length:535 Species:Homo sapiens
Sequence 2:NP_651648.5 Gene:CG11828 / 43416 FlyBaseID:FBgn0039616 Length:458 Species:Drosophila melanogaster


Alignment Length:515 Identity:131/515 - (25%)
Similarity:228/515 - (44%) Gaps:74/515 - (14%)


- Green bases have known domain annotations that are detailed below.


Human    30 MTDLIYAEKELVQSLKEYILVEEAKLSKIKSWANKMEALTSKSAADAEGYLAHPVNAYKLVKRLN 94
            |..|:..|.||:..:::|.:..:.|::.::::..:.....:...||...|:|:|:.::.|::|..
  Fly     1 MASLLQIEDELIGYMRQYAMELQHKVNTMRTFQEEWMTRRALGPADPTSYVANPLISFPLMRRTY 65

Human    95 TDWPALEDLVLQDSAAGFIANLSVQRQFFPTDEDEIG------AAKALMRLQDTYRLDPGTISRG 153
            ||.|.|.:|..::...|..      ::|...|...|.      |...::|.|..|.:|...::.|
  Fly    66 TDVPKLLELAREEFKPGPF------QKFIDYDLSSISDVELETAVTGMLRFQGVYGMDESEMANG 124

Human   154 ELPGTKYQAMLSVDDCFGMGRSAYNEGDYYHTVLW----MEQVLKQLD-AGEEATTTKSQVLDYL 213
            :|.|.:|.:.:|..||..:.....|.........|    ::|..::|| ......|.:||:.:.|
  Fly   125 KLHGKQYNSRMSAADCLAVATHLENVDKGKLACKWFKVAIDQYEEKLDPVNRLLQTGRSQIYEKL 189

Human   214 SYAVFQLGDLHRALELTRRLLSLDPSHERAGGNLRYFEQLLEEEREKTLTNQTEAELATPEGIYE 278
            ...:..:.||              |:.:.|      |...:     ...:.:...:||      :
  Fly   190 GLTLLAMHDL--------------PASQAA------FRDSI-----GWASKEDNTDLA------K 223

Human   279 RPVDYLPERDVYESLCRGEGVKLTPRRQKRLFCRYHHGNRAPQLLIAPFKEEDEWDSPHIVRYYD 343
            ...|.|....|:...|||:  .|.|.: ..|.|||.. :.:|.|.:||.|.|.....|.:..::|
  Fly   224 HLKDKLAHMFVHVDNCRGK--NLLPSK-SYLRCRYLR-DGSPFLRMAPVKLEQLNIEPFVGLFHD 284

Human   344 VMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDD----PVVARVNRRMQH 404
            .:|..|.:.:..:...:|                .:|...||.:|...|    ..|.|:::|::.
  Fly   285 AISPAEQKDLLHLTDSRL----------------EHRKKDSSSVEAKVDTNASDHVRRIHQRIED 333

Human   405 ITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFLNYMSDVEAGGATVF 469
            |||..::.:|.|.|:|||:|||...|.|..:  .::...:.....|.|:.:.|:|||:.||...|
  Fly   334 ITGFDLEESEPLTVSNYGIGGQDFIHLDCEQ--PKEFIGYYPKEYRSASAMFYLSDVQMGGYASF 396

Human   470 PDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFHERGQEFLRPC 529
            ||||....|::|:|:.|:|...||..|.|:..|.||||:|.:||:.||....||...:.|
  Fly   397 PDLGFGFKPRRGSALVWHNTDNSGNCDTRSLQATCPVLLGNQWVAKKWISGSGQWRRKSC 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
P4HA2NP_001136071.1 P4Ha_N 26..155 CDD:311993 29/130 (22%)
TPR 207..240 6/32 (19%)
P4Hc 346..519 CDD:214780 57/176 (32%)
CG11828NP_651648.5 P4Ha_N 1..126 CDD:285528 29/130 (22%)
P4Hc 287..445 CDD:214780 56/175 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D192165at33208
OrthoFinder 1 1.000 - - FOG0000199
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10869
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X129
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
55.020

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