DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCND3 and CycB

DIOPT Version :10

Sequence 1:NP_001410981.1 Gene:CCND3 / 896 HGNCID:1585 Length:362 Species:Homo sapiens
Sequence 2:NP_726244.1 Gene:CycB / 37618 FlyBaseID:FBgn0000405 Length:530 Species:Drosophila melanogaster


Alignment Length:137 Identity:43/137 - (31%)
Similarity:64/137 - (46%) Gaps:11/137 - (8%)


- Green bases have known domain annotations that are detailed below.


Human   146 EVFPLAMNYLDRYLSCV-PTRKAQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRD 209
            |.|.||:..:||||..| .|::..|||:|...:.:|:|..|..|..|......||...:.||:|.
  Fly   309 ETFQLAVAIIDRYLQVVKDTKRTYLQLVGVTALFIATKYEELFPPAIGDFVFITDDTYTARQIRQ 373

Human   210 WEVLVLGKLKWDLAAVIAHDFLAFILHRLSL---PRDRQALVKKHAQTFLALCATDYTFAMYPPS 271
            .|:.:...:..:|:..:...|    |.|.|.   ..|....:.|:   |:.|.:.||..|.|.||
  Fly   374 MELQIFKAIDCNLSRPLPIHF----LRRYSKAAGAEDEHHTMSKY---FIELASVDYEMATYRPS 431

Human   272 MIATGSI 278
            .||..|:
  Fly   432 EIAAASL 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCND3NP_001410981.1 None
CycBNP_726244.1 CYCLIN_CCNB1-like_rpt1 254..384 CDD:410211 25/74 (34%)
CYCLIN_CCNB1-like_rpt2 389..509 CDD:410213 17/57 (30%)

Return to query results.
Submit another query.