DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AP3D1 and g

DIOPT Version :9

Sequence 1:NP_001248755.1 Gene:AP3D1 / 8943 HGNCID:568 Length:1215 Species:Homo sapiens
Sequence 2:NP_524785.2 Gene:g / 44819 FlyBaseID:FBgn0001087 Length:1034 Species:Drosophila melanogaster


Alignment Length:1060 Identity:582/1060 - (54%)
Similarity:733/1060 - (69%) Gaps:108/1060 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     1 MALKMVKGS-IDRMFDKNLQDLVRGIRNHKEDEAKYISQCIDEIKQELKQDNIAVKANAVCKLTY 64
            ||||.|||: .:|||||||.||||||||:|::||||||.||:||||||:||||:||.|||.||||
  Fly     1 MALKKVKGNFFERMFDKNLTDLVRGIRNNKDNEAKYISTCIEEIKQELRQDNISVKCNAVAKLTY 65

Human    65 LQMLGYDISWAAFNIIEVMSASKFTFKRIGYLAASQSFHEGTDVIMLTTNQIRKDLSSPSQYDTG 129
            :||||||||||.||||||||:|:||.||||||||||.||..::::|||||.|||||:|.:|||.|
  Fly    66 IQMLGYDISWAGFNIIEVMSSSRFTCKRIGYLAASQCFHPDSELLMLTTNMIRKDLNSQNQYDAG 130

Human   130 VALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPAFPRLKEKLED 194
            |||:|||||::|||:||||||||||||.||||:|.||||:||||||:|||:||||||:|||||||
  Fly   131 VALSGLSCFISPDLSRDLANDIMTLMSSTKPYLRMKAVLMMYKVFLRYPEALRPAFPKLKEKLED 195

Human   195 PDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIKIIKLFGALTPLEPRLGKKL 259
            ||||||||||||||||||:||||||.|||:||||||:|||||:||||||||||||||||||||||
  Fly   196 PDPGVQSAAVNVICELARKNPKNYLPLAPIFFKLMTTSTNNWMLIKIIKLFGALTPLEPRLGKKL 260

Human   260 IEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGL 324
            ||||||||||||||||||||:|||||||||:||||||||||||||||||||||||||||||||||
  Fly   261 IEPLTNLIHSTSAMSLLYECINTVIAVLISISSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGL 325

Human   325 LAMSKILKTHPKSVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAEG 389
            |||||||||||||||:||||||.|||||||||||||||||||||||||||||||:|:.|:::|||
  Fly   326 LAMSKILKTHPKSVQAHKDLILACLDDKDESIRLRALDLLYGMVSKKNLMEIVKRLLGHMERAEG 390

Human   390 TTYRDELLTKIIDICSQSNYQYITNFEWYISILVELTRLE-GTRHGHLIAAQMLDVAIRVKAIRK 453
            :.||||||.|:|:||:||:|.|:||||||:::||||.:|| |:|||.|||.|:|||||||..:|:
  Fly   391 SAYRDELLYKVIEICAQSSYLYVTNFEWYLTVLVELIQLEAGSRHGRLIAEQLLDVAIRVPVVRQ 455

Human   454 FAVSQMSALLDSAHLLASSTQRNGICEVLYAAAWICGEFSEHLQEPHHTLEAMLRPRVTTLPGHI 518
            |||::|:.|||:   ...|.|.|.:.|||||||||.|||:..|::...||..:||||:  |||||
  Fly   456 FAVNEMTNLLDT---FTVSAQSNSMYEVLYAAAWIVGEFAGELEDAEKTLNILLRPRL--LPGHI 515

Human   519 QAVYVQNVVKLYASILQQKEQAGEAEGAQAVTQLMVDRLPQFVQSADLEVQERASCILQLVKHIQ 583
            |.||||||:||:|.:.....:..:..|...:...::|:|..|..|:|:||||||:....|::.::
  Fly   516 QGVYVQNVIKLFARLATTCLELQDLPGLVTLCDHVLDKLQHFNGSSDIEVQERANSACMLIEMLR 580

Human   584 K-------LQAKD-----------VPVAEEVSALFAGELNPVAPKAQKKVPVPEGLDLDAWINEP 630
            .       ..|.|           :.:.:|::.||.|||.|||||||:|||:|:|||||.|||.|
  Fly   581 NQLSTSTDAMAMDTTTEGGIPPLAIEIVQEMTLLFTGELIPVAPKAQRKVPLPDGLDLDEWINAP 645

Human   631 -----LSDSESEDERPRAVFHEEEQR------RPKHRPS-EADEEELARRREARKQEQANNPFYI 683
                 .|.|.||.::.. :|....|.      ..|.|.| |...|:|.|:|.||..||:|||.|:
  Fly   646 PPEDAASSSSSEHDKDE-LFVSATQAGTGADGGEKRRQSLELTPEQLERQRMARLIEQSNNPHYL 709

Human   684 KSSP-----SPQKRYQDTPGVEHIPVVQIDLSV----PLKVPGLPMSDQYVKLEEERRHRQKLEK 739
            ||:|     |...:|.:   ::.||:.::.|.:    .|:|.....||:|:: |::.....|..|
  Fly   710 KSTPTASGASNADQYDN---IDDIPITELPLDMEGVAALRVGITKRSDKYLQ-EQQAAQGSKDGK 770

Human   740 DKRRKKRKEKEKKGKRRHSSLPTESDEDIAPAQQVDIVTEEMPENALPSDEDDK----DPNDPYR 800
            .|.:|.:|.|:.|.|..::| .:||:.:..|...|: .|.:|||....||.:||    |||||:|
  Fly   771 KKHKKGKKSKKAKNKVAYNS-SSESEGEPKPLHIVN-TTLDMPEGVSMSDSEDKDGKYDPNDPHR 833

Human   801 ALDIDLD--------------KPLADSEKLPIQKHRNTETSKSPEKDV---PMVEKKSKKPKKKE 848
            ||||:||              |..||.|.|           |:|....   ...:|..||.|.|:
  Fly   834 ALDIELDITEFEAPAVRSASKKSAADKENL-----------KTPADSAGGGNAAKKDRKKDKDKD 887

Human   849 KKHKEKERDKEKKKEKEKKAED--LDFWLSTTPPPAPAPAPAPVPSTGELSVNTV--TTPK---- 905
            |:.|.|...:|.|:|:::.|..  :|...:.||.|:|:...|   ::...:.:||  ..||    
  Fly   888 KERKVKREHRESKRERKEAAVQSVIDLIDADTPTPSPSHISA---TSNNNNTSTVLPDAPKHHKK 949

Human   906 --------DECEDAKTEAQGEE-DDAEGQDQDKKSPKPKKKKHRKEKEERTKGKKKSKKQPPGSE 961
                    ||..||...|.|.. .|..|::..:.:.|..||||:|||.:|.:.||.|:.....:.
  Fly   950 KKNKEKTTDEAPDALATATGSSIIDVGGEEASEVASKVHKKKHKKEKSQRKEKKKASESASVSAI 1014

Human   962 EAAG---EPVQNGAPEEEQL 978
            .:.|   :|:....|.:|.|
  Fly  1015 VSIGDYEQPLGISTPSKEIL 1034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AP3D1NP_001248755.1 Adaptin_N 32..581 CDD:279882 408/549 (74%)
HEAT repeat 151..172 CDD:293787 16/20 (80%)
Cnd1 155..265 CDD:289487 97/109 (89%)
HEAT repeat 184..212 CDD:293787 26/27 (96%)
HEAT repeat 220..262 CDD:293787 37/41 (90%)
HEAT repeat 271..292 CDD:293787 18/20 (90%)
HEAT repeat 301..330 CDD:293787 28/28 (100%)
HEAT repeat 335..364 CDD:293787 26/28 (93%)
BLVR 661..807 CDD:283923 57/158 (36%)
gNP_524785.2 Adaptin_N 33..578 CDD:279882 408/549 (74%)
HEAT repeat 152..173 CDD:293787 16/20 (80%)
HEAT repeat 185..213 CDD:293787 26/27 (96%)
Cnd1 <193..266 CDD:289487 67/72 (93%)
HEAT repeat 221..263 CDD:293787 37/41 (90%)
HEAT repeat 272..290 CDD:293787 16/17 (94%)
HEAT repeat 302..331 CDD:293787 28/28 (100%)
BLVR 687..840 CDD:283923 57/158 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152617
Domainoid 1 1.000 805 1.000 Domainoid score I72
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 984 1.000 Inparanoid score I310
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52588
OrthoDB 1 1.010 - - D163216at33208
OrthoFinder 1 1.000 - - FOG0005167
OrthoInspector 1 1.000 - - oto89116
orthoMCL 1 0.900 - - OOG6_102126
Panther 1 1.100 - - LDO PTHR22781
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R64
SonicParanoid 1 1.000 - - X3686
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.900

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