Sequence 1: | XP_016878188.1 | Gene: | HERC1 / 8925 | HGNCID: | 4867 | Length: | 4909 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523943.1 | Gene: | Rcc1 / 38669 | FlyBaseID: | FBgn0002638 | Length: | 547 | Species: | Drosophila melanogaster |
Alignment Length: | 417 | Identity: | 101/417 - (24%) |
---|---|---|---|
Similarity: | 167/417 - (40%) | Gaps: | 90/417 - (21%) |
- Green bases have known domain annotations that are detailed below.
Human 4094 GTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGD 4158
Human 4159 YGKLGHGNSD--RQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGN--GDYGRLGLGNT 4219
Human 4220 SNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA---------- 4274
Human 4275 -----------KSSP---------------QKIDVLCGIG------------------------- 4288
Human 4289 --IKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN-HNRPQQIPVLAGVIIEDVAVGAEH 4350
Human 4351 TLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT--GLQGKNVRQISAGRCHSAAWTAPP--- 4410
Human 4411 ----VPPRAPGVSVPLQLGLPDTVPPQ 4433 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC1 | XP_016878188.1 | None | |||
Rcc1 | NP_523943.1 | RCC1 | 42..89 | CDD:278826 | 15/50 (30%) |
RCC1 | 92..141 | CDD:278826 | 18/50 (36%) | ||
RCC1_2 | 131..158 | CDD:290274 | 9/26 (35%) | ||
RCC1 | 144..193 | CDD:278826 | 15/50 (30%) | ||
RCC1_2 | 182..209 | CDD:290274 | 6/27 (22%) | ||
RCC1 | 363..414 | CDD:278826 | 18/50 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165143342 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.750 |