Sequence 1: | NP_055421.1 | Gene: | HERC3 / 8916 | HGNCID: | 4876 | Length: | 1050 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_609369.1 | Gene: | Ufd4 / 34378 | FlyBaseID: | FBgn0032208 | Length: | 2727 | Species: | Drosophila melanogaster |
Alignment Length: | 1124 | Identity: | 213/1124 - (18%) |
---|---|---|---|
Similarity: | 356/1124 - (31%) | Gaps: | 362/1124 - (32%) |
- Green bases have known domain annotations that are detailed below.
Human 117 GLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFT--WGKNSHGQLGLGKEFPSQA 179
Human 180 SPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD----RESPCHVKLLR 240
Human 241 TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH-------DSMNDEVNPRRVLELMGSEVTQ 298
Human 299 IACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYHI 363
Human 364 VKQIFSGGDQTFVLCSKYENYSPAVDFR----TMNQAHYTSLINDETIAVWRQKLSEHNNANTIN 424
Human 425 GVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVL--------------FEKLMNSQH 475
Human 476 SMILEQILNSFE--SCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAILRLDT 538
Human 539 NPSKVLDNWWSQVCPKYFMKLVNLYKGAVLYLLRGRKTFLIPVLFNNYITAALKLLEKLYKVNLK 603
Human 604 ----------VKHVEYDTFYIPEISNLVDIQ-EDYLMWFLHQAGMKARPSIIQDTVTLCSYPFIF 657
Human 658 DAQAKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRN------------- 709
Human 710 -------NLVGDALRELSIHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKEL--------- 758
Human 759 -------------------LNPI--------YGMFTYYQDSNLLWFSDTC--FVEHNWFHLIGIT 794
Human 795 CGLAIYNSTVVDLHFPLA----------------LYKKLLNVKPG-------------------- 823
Human 824 --------------LEDLKELSPTEGRSLQEL---------LDYP-------------------- 845
Human 846 -GEDVE-ETFCLNFTICRES--YGVIEQKKLIPGGDNVTVCKDNRQEFVDAYVNYVFQISVHEWY 906
Human 907 TAFSSGFLKVCGGKVLELFQPSELRAMMVGNSNYNWEELEETAIY---KGDYSATHPTVKLFWET 968
Human 969 FHEFPLEKKKKFLLFLTGSDRIPIYGMASLQ---IVIQSTASGEEYLPVAHTCYNLLDLPKYSSK 1030
Human 1031 EILSARLTQALDNYEGFSL 1049 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HERC3 | NP_055421.1 | RCC1 1 | 1..51 | ||
ATS1 | 2..331 | CDD:227511 | 42/226 (19%) | ||
RCC1 2 | 52..101 | ||||
RCC1 3 | 102..154 | 8/36 (22%) | |||
RCC1 4 | 156..207 | 12/52 (23%) | |||
RCC1 5 | 208..259 | 7/54 (13%) | |||
RCC1 6 | 261..311 | 13/56 (23%) | |||
RCC1 | 313..377 | CDD:366085 | 5/63 (8%) | ||
RCC1 7 | 313..366 | 3/52 (6%) | |||
HECTc | 702..1048 | CDD:238033 | 109/492 (22%) | ||
Ufd4 | NP_609369.1 | ANK repeat | 393..420 | CDD:293786 | |
ANK | 396..509 | CDD:238125 | |||
ANK repeat | 422..453 | CDD:293786 | |||
ANK repeat | 455..484 | CDD:293786 | |||
F5_F8_type_C | 1173..1298 | CDD:329041 | |||
MIB_HERC2 | 1333..1389 | CDD:310955 | |||
DamX | 1576..>1725 | CDD:330571 | |||
HECTc | 2265..2725 | CDD:238033 | 107/473 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5021 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |