DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPNE1 and CG8563

DIOPT Version :9

Sequence 1:NP_003906.2 Gene:CPNE1 / 8904 HGNCID:2314 Length:542 Species:Homo sapiens
Sequence 2:NP_001261515.1 Gene:CG8563 / 38826 FlyBaseID:FBgn0035777 Length:440 Species:Drosophila melanogaster


Alignment Length:135 Identity:33/135 - (24%)
Similarity:44/135 - (32%) Gaps:53/135 - (39%)


- Green bases have known domain annotations that are detailed below.


Human   320 EYLMALWSVGSVVQDYDSDKLFPAFGFGAQVPPD-----------WQVS-HEFALNFNPSNPYCA 372
            |.|..|.:...|:||.:. .|.|.      |.||           |:.: |.:|      ...|:
  Fly   221 ELLSNLRAFTRVLQDVEI-FLVPL------VNPDGYEYTHTTDRFWRKNRHRYA------GHSCS 272

Human   373 GIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAHQGTASQYFMLLLLTDGAVTDVEATR 437
            |    ||..|            ||.   ||   :..|.|.|...|:.:      .|...:.|...
  Fly   273 G----VDINR------------NFG---NH---WNYQGASQNLCSEVY------SGTAPNSEPET 309

Human   438 EAVVR 442
            .||||
  Fly   310 SAVVR 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPNE1NP_003906.2 C2A_Copine 11..129 CDD:176013
C2B_Copine 143..250 CDD:176012
vWA_copine_like 256..514 CDD:238736 33/135 (24%)
CG8563NP_001261515.1 M14_CP_A-B_like 146..437 CDD:199844 33/135 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4063
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.950

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