DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PRPF4B and mnb

DIOPT Version :9

Sequence 1:NP_003904.3 Gene:PRPF4B / 8899 HGNCID:17346 Length:1007 Species:Homo sapiens
Sequence 2:NP_728107.2 Gene:mnb / 32771 FlyBaseID:FBgn0259168 Length:1047 Species:Drosophila melanogaster


Alignment Length:560 Identity:161/560 - (28%)
Similarity:249/560 - (44%) Gaps:88/560 - (15%)


- Green bases have known domain annotations that are detailed below.


Human   471 RDRGRRSRSRLR-RRSRSRGGRRRRSRSKVKEDKFKGSLSEGMKVEQESSSDDNLEDFDVEEEDE 534
            |||.|...:.|. :.|.|...|.:..|:........||....:...|.|.|....          
  Fly   127 RDRDRVDGNVLMVQGSSSSSSRMKAERALYYTMSAYGSSGGSVDAAQGSGSGGGR---------- 181

Human   535 EALIEQRRIQRQAIVQKYKYLAED---SNMSVPSEPSSPQSSTRTRSPS---PDDILERVAADVK 593
                     ||.|.:......|||   ::..|....|||.||:..|:..   |:...|..:..::
  Fly   182 ---------QRHAPLYGRFVDAEDLPATHRDVMHHHSSPSSSSEVRAMQARIPNHFREPASGPLR 237

Human   594 EYERENVDTFEASVKAKH-NLMTVEQNNGSSQKKLLAPDMFTESDDMFAAYFDSARLRAAGIGKD 657
            :...:.:.|:      || |.:...:....:|:        |:.||      ||:         :
  Fly   238 KLSVDLIKTY------KHINEVYYAKKKRRAQQ--------TQGDD------DSS---------N 273

Human   658 FKENPNLRDNWTDAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNN 722
            .||.....|.:.|....|.:..||....||.:....|:|.|..||:|.|: .....||:|||:|.
  Fly   274 KKERKLYNDGYDDDNHDYIIKNGEKFLDRYEIDSLIGKGSFGQVVKAYDH-EEQCHVAIKIIKNK 337

Human   723 ELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGL 787
            :........|::.|:.:|.||.::|::.::|.|||..:.|||||||.||.||.::|:..... |:
  Fly   338 KPFLNQAQIEVKLLEMMNRADAENKYYIVKLKRHFMWRNHLCLVFELLSYNLYDLLRNTNFR-GV 401

Human   788 HIKAVRSYSQQLFLALKLLK--RCNILHADIKPDNILV-NESKTILKLCDFGSASHVADNDITPY 849
            .:...|.::|||..||..|.  ..||:|.|:||:|||: |..::.:|:.||||:..:... |..|
  Fly   402 SLNLTRKFAQQLCTALLFLSTPELNIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR-IYHY 465

Human   850 LVSRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIR 914
            :.|||||:||:::|..||..|||||:||.|.|::||:.||.|......:...:::.| ||.|.:.
  Fly   466 IQSRFYRSPEVLLGIQYDLAIDMWSLGCILVEMHTGEPLFSGCNEVDQMNKIVEVLG-MPPKYLL 529

Human   915 KGVFKDQHFDQNLNFMYIEVDKVTEREKVTVMSTIN------PTKDLLADLIGCQ-------RLP 966
            ....|.:.|          .||:.......:....|      |....|.|::|.:       ||.
  Fly   530 DQAHKTRKF----------FDKIVADGSYVLKKNQNGRKYKPPGSRKLHDILGVETGGPGGRRLD 584

Human   967 EDQRKKVHQL--KDLLDQILMLDPAKRISINQALQHAFIQ 1004
            |........|  |||:.::|..||..|::...||||.|.:
  Fly   585 EPGHSVSDYLKFKDLILRMLDFDPKTRVTPYYALQHNFFK 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRPF4BNP_003904.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..99
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..533 14/62 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 559..583 8/26 (31%)
STKc_PRP4 686..1003 CDD:271037 114/334 (34%)
S_TKc 694..1003 CDD:214567 112/326 (34%)
mnbNP_728107.2 PKc_DYRK1 289..628 CDD:271128 118/350 (34%)
S_TKc 303..623 CDD:214567 113/333 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.