DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MTMR2 and YMR1

DIOPT Version :10

Sequence 1:NP_057240.3 Gene:MTMR2 / 8898 HGNCID:7450 Length:643 Species:Homo sapiens
Sequence 2:NP_012644.1 Gene:YMR1 / 853574 SGDID:S000003871 Length:688 Species:Saccharomyces cerevisiae


Alignment Length:661 Identity:195/661 - (29%)
Similarity:310/661 - (46%) Gaps:152/661 - (22%)


- Green bases have known domain annotations that are detailed below.


Human   100 AVRGTLTVTNYRLYFKS----------------MERDPPFVLDASLGVINRVEKIGGASSRGENS 148
            |.:|||.:|.:.|.|:|                :.::|...|.:.|...|::: :.|..|:....
Yeast    20 ATQGTLHLTTHHLIFESPQLSTEFWFPYPLIYGVHKNPGSTLLSKLTSTNQIQ-LEGTDSQNYKL 83

Human   149 Y---------GLETVCKD--IRNLRFAHKPEGRTRRSIFENLMKYAFPVSNNLPLFAFEY----- 197
            |         .::.:.||  :.:|.|......:.|: ::::::.... :||...|:||.|     
Yeast    84 YQGKDLWSFVNIKVIGKDYAVFSLDFGGDLHLQARK-VYDSILNLTV-LSNITQLYAFIYISNNL 146

Human   198 -KEVFPENGWKLYDPLLEYRRQGIPNES----WRITKINERYELCDTYPALLVVPANIPDEELKR 257
             :::...:.|.:|||:.|:||||:.::.    ||::.:||.||.|.|||:.|.||.:..|..||.
Yeast   147 ERKLPSPDSWDIYDPIKEFRRQGLDSKDETCPWRLSTVNEHYEFCPTYPSKLFVPRSTSDILLKH 211

Human   258 VASFRSRGRIPVLSWIHPESQATITRCSQPMVGVSGKRSKEDEKYL----QAIMDSNAQSHKIFI 318
            .:.|||:.|||||::.|..:...|.|.|||:.|:..:||.:|||.:    .:..:.:.:..|..|
Yeast   212 ASKFRSQKRIPVLTYHHKATDCNILRSSQPLPGLINQRSIQDEKLVWESFNSFCNKDIRRTKHVI 276

Human   319 FDARPSVNAVANKAKGGGYESEDAYQ-----------------NAELVFLDIHNIHVMRESLRKL 366
            .||||..||:|..|.|||.|:.|.|.                 ....:||.|.|||::..:...:
Yeast   277 VDARPRTNALAQMALGGGTENMDNYNFFLADNNMGVDKSLKLPTVTRLFLGIDNIHIVSNTAAYM 341

Human   367 KEIVYPNIE-----ETHWLSNLESTHWLEHIKLILAGALRIADKVESGKTSVVVHCSDGWDRTAQ 426
            .|::....:     |.:.:.:.:.::||:...|||.....:...:....::|:||||||||||:|
Yeast   342 TEVICQGGDLNLPLEQNLIRSQKFSNWLKLNTLILKSVDMLLKSIIFNHSNVLVHCSDGWDRTSQ 406

Human   427 LTSLAMLMLDGYYRTIRGFEVLVEKEWLSFGHRFQLRVGH----------------------GD- 468
            :.||..:.||.:|||..||.:||||:|.||||||..|.||                      || 
Yeast   407 VVSLLEICLDPFYRTFEGFMILVEKDWCSFGHRFLERSGHLNSDIRFHDNTMHSNFNDVDTNGDD 471

Human   469 --------KNHADADR--------------------------------SPVFLQFIDCVWQMTRQ 493
                    .::|:.|.                                ||||.||:|||:|:..|
Yeast   472 LDIGVNTQDDYAEDDEGGEDETNLINLSRISKKFNENFKLNKKSLKFVSPVFQQFLDCVYQLLTQ 536

Human   494 FPTAFEFNEYFLITILDHLYSCLFGTFLCNSEQQRGKENLPKRTVSLWSYINSQLEDFTNPLY-- 556
            .|..|||||.||..::.|||||.:||||.|||:::.::|||.:|.|:|.|..|:.:.|.||.:  
Yeast   537 NPDLFEFNERFLRRLVYHLYSCQYGTFLSNSEKEKFQQNLPNKTKSVWDYFRSRRKQFINPNFIQ 601

Human   557 ---GSYSNH---------VLYPVASMRHLELWVGYYIRWNPRMKPQEPIHNRYKELLAKRAELQK 609
               ...:.|         |.:....::.::.|...|.|.:..|.         .||..||..:..
Yeast   602 RKRSGMNEHDQNLEEEEKVEWISPDLKKVQWWWQLYGRKDSEMN---------DELRHKRDSVPI 657

Human   610 KVEELQREISN 620
            .|::..:|.||
Yeast   658 SVDKKSKEHSN 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MTMR2NP_057240.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56
PH-like 73..187 CDD:473070 20/113 (18%)
Myotub-related 202..528 CDD:461958 144/418 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 615..643 3/6 (50%)
YMR1NP_012644.1 PH-like 1..>44 CDD:473070 8/23 (35%)
Myotub-related 152..570 CDD:461958 144/417 (35%)
Blue background indicates that the domain is not in the aligned region.

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