DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC5A6 and slc5a6

DIOPT Version :10

Sequence 1:NP_066918.2 Gene:SLC5A6 / 8884 HGNCID:11041 Length:635 Species:Homo sapiens
Sequence 2:XP_031757499.1 Gene:slc5a6 / 448188 XenbaseID:XB-GENE-5737332 Length:638 Species:Xenopus tropicalis


Alignment Length:639 Identity:417/639 - (65%)
Similarity:493/639 - (77%) Gaps:30/639 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    24 FSIMDYVVFVLLLVLSLAIGLYHACRGWGRHTVGELLMADRKMGCLPVALSLLATFQSAVAILGV 88
            |:.:||::||||||||.|||||:|..|..:.|:.|.|:|:|.|..||::||||||||||||||||
 Frog     3 FTTVDYIIFVLLLVLSSAIGLYYALSGGKQRTMQEFLLANRSMSFLPISLSLLATFQSAVAILGV 67

Human    89 PSEIYRFGTQYWFLGCCYFLGLLIPAHIFIPVFYRLHLTSAYEYLELRFNKTVRVCGTVTFIFQM 153
            |||||||||:||||||.|.:||||||||||||||||.|||.||||||||:|.||:||||||||||
 Frog    68 PSEIYRFGTEYWFLGCSYIIGLLIPAHIFIPVFYRLRLTSTYEYLELRFSKAVRICGTVTFIFQM 132

Human   154 VIYMGVVLYAPSLALNAVTGFDLWLSVLALGIVCTVYTALGGLKAVIWTDVFQTLVMFLGQLAVI 218
            |||||||||||:||.||||||.||.:||::|:|||:||.||||||||||||.||||||.||||||
 Frog   133 VIYMGVVLYAPALAFNAVTGFSLWGAVLSMGLVCTLYTTLGGLKAVIWTDVIQTLVMFAGQLAVI 197

Human   219 IVGSAKVGGLGRVWAVASQHGRISGFELDPDPFVRHTFWTLAFGGVFMMLSLYGVNQAQVQRYLS 283
            |||:.||||..:||.:|:::.:|:|...:||||.||:||:||.||:|||||||||||||||||||
 Frog   198 IVGTIKVGGFDQVWNIATENNKIAGVNWNPDPFERHSFWSLAIGGIFMMLSLYGVNQAQVQRYLS 262

Human   284 SRTEKAAVLSCYAVFPFQQVSLCVGCLIGLVMFAYYQEYPMSIQQAQAAPDQFVLYFVMDLLKGL 348
            |||||.|:||||||||.||:.|.:|||.||||||||:..|.:..|..:.|||.|||||||:||.|
 Frog   263 SRTEKEAILSCYAVFPCQQLVLALGCLTGLVMFAYYKINPSAYPQDISVPDQMVLYFVMDILKDL 327

Human   349 PGLPGLFIACLFSGSLSTISSAFNSLATVTMEDLIRPWFPEFSEARAIMLSRGLAFGYGLLCLGM 413
            |||||||:||||||:||||||||||||||||:|||:|.||..:|::|..||:|||.|||||||||
 Frog   328 PGLPGLFVACLFSGALSTISSAFNSLATVTMQDLIKPHFPSLTESQATWLSKGLALGYGLLCLGM 392

Human   414 AYISSQMGPVLQAAISIFGMVGGPLLGLFCLGMFFPCANPPGAVVGLLAGLVMAFWIGIGSIVTS 478
            |||||.||.|||||:|||||||||||||||||.|||..|..||:.||.|||||||||||||.||.
 Frog   393 AYISSLMGSVLQAALSIFGMVGGPLLGLFCLGFFFPFTNSIGAMSGLAAGLVMAFWIGIGSFVTR 457

Human   479 MGSSMPPSPSNGSSFSLPTNLTVATVTTLMPLTTFSKP-TGLQRFYSLSYLWYSAHNSTTVIVVG 542
            |.|..||...|.:|.....|||...::||:...|..|. :|||:||||||:||||||||||::||
 Frog   458 MPSVPPPPLLNATSVPDFGNLTTTVMSTLLTSPTAKKSVSGLQKFYSLSYMWYSAHNSTTVVIVG 522

Human   543 LIVSLLTGRMRGRSLNPATIYPVLPKLLSLLPLSCQKRLHCRSYGQDHL-DTG------------ 594
            ||||||||..:||.::|.|:|.||||||..||...:::|.   ||..|: :.|            
 Frog   523 LIVSLLTGPTKGRDIDPRTVYLVLPKLLFFLPERYREKLR---YGVPHIVEVGDCLSPRLLQVPY 584

Human   595 --------LFPEKPRNGVL-GDSR--DKEAM--ALDGTAYQGSSSTCILQETSL 635
                    |..||..||.| |:::  :||.|  .|.|.....:..:.::|||||
 Frog   585 DEHSPPHDLVTEKSCNGFLNGNAKYSEKEEMEEKLSGFTRSDTGHSYVVQETSL 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC5A6NP_066918.2 SLC5sbd_SMVT 24..550 CDD:271394 380/526 (72%)
slc5a6XP_031757499.1 SLC5-6-like_sbd 3..530 CDD:444915 380/526 (72%)

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