DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC5A6 and Slc5a6

DIOPT Version :10

Sequence 1:NP_066918.2 Gene:SLC5A6 / 8884 HGNCID:11041 Length:635 Species:Homo sapiens
Sequence 2:NP_808538.1 Gene:Slc5a6 / 330064 MGIID:2660847 Length:634 Species:Mus musculus


Alignment Length:181 Identity:37/181 - (20%)
Similarity:58/181 - (32%) Gaps:45/181 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   198 PLISPENLGNRISNV----------DPWVTPPYCPQIQSPLHQSLE-----RAADSSPWAPPQAC 247
            ||..||.:....:.|          ...:|..:.....||:.:|..     .|..|.|..|....
Mouse   794 PLTEPEQVTETAAAVVDLPLSVPTNSDTITDTFDLSQSSPVSESTTLTSSITAPPSDPINPVHMT 858

Human   248 PGMQMSPEPRNKTGHWTQSTEPAELTKVYQSLSVSP-----EPCLSLGSPLLLPRPSCQRLQPQP 307
            |....:|:..::..  ..|::||.:|.:.....|||     ||.....||..:..|..       
Mouse   859 PPDSSTPKTHSRPS--ISSSDPANVTLLVDLAEVSPAVPSEEPVQVPSSPTSVDHPGT------- 914

Human   308 QPQPQWGCWGHDAEVLSTSEDQGSSPALQLP------VASPTPSSGLQLSG 352
                      ..::|......||.|.|...|      :|.|..:..|::.|
Mouse   915 ----------IISKVTENESVQGPSHAALNPISPQGDIAVPLVNHELEIDG 955

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC5A6NP_066918.2 SLC5sbd_SMVT 24..550 CDD:271394 37/181 (20%)
Slc5a6NP_808538.1 SLC5-6-like_sbd 23..548 CDD:444915
Blue background indicates that the domain is not in the aligned region.

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