DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC5A6 and rumpel

DIOPT Version :10

Sequence 1:NP_066918.2 Gene:SLC5A6 / 8884 HGNCID:11041 Length:635 Species:Homo sapiens
Sequence 2:NP_572397.1 Gene:rumpel / 31674 FlyBaseID:FBgn0029950 Length:601 Species:Drosophila melanogaster


Alignment Length:597 Identity:179/597 - (29%)
Similarity:312/597 - (52%) Gaps:54/597 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    21 MSTFSIMDYVVFVLLLVLSLAIGLYHACR-------------GWGRHTVGELLMADRKMGCLPVA 72
            :.:|...||:||.|:|.:...||:|...:             .....:....|:..|:|...|:.
  Fly    10 LQSFGWPDYLVFCLMLAICAVIGIYFCLQLRLESRKQKANGSEEAASSAASYLVGGRQMKIFPIT 74

Human    73 LSLLATFQSAVAILGVPSEIYRFGTQY-WFLGCCYFLGLLIPAHIFIPVFYRLHLTSAYEYLELR 136
            :||:::|.|.:.:||.|:|:|.:|.|| :.:|....:|..: .:.|:|||:.|:|.|.|:|||.|
  Fly    75 MSLISSFISGITLLGTPTEVYLYGAQYMYIMGSLVLMGFCM-YYFFLPVFHELNLISTYKYLEQR 138

Human   137 FNKTVRVCGTVTFIFQMVIYMGVVLYAPSLALNAVTGFDLWLSVLALGIVCTVYTALGGLKAVIW 201
            :|:::|:.|:|.||...::::.:|:|.|::|.|..||.::.:....:.:||..||.:||||||:|
  Fly   139 YNRSLRLFGSVMFIVASLLWLPIVIYVPAIAFNQATGVNIHIVTPIVCVVCIFYTCIGGLKAVVW 203

Human   202 TDVFQTLVMFLGQLAVIIVGSAKVGGLGRVWAVASQHGRISGFELDPDPFVRHTFWTLAFGGVFM 266
            |||.|||:||.....|:|.|:..:||.|.||..|.:..|:.......|...|:||::|..|||..
  Fly   204 TDVIQTLIMFGAMALVLIKGTLDIGGPGVVWQKAQETARLEVPNFSADLSERYTFYSLVLGGVAH 268

Human   267 MLSLYGVNQAQVQRYLSSRTEKAAVLSCYAVFPFQQVSLCVGCLIGLVMFAYYQEY-PMSIQQAQ 330
            .|....::|..:|||||..|.:.|.::.:.........|.:....||:::|.|.:. |:..:.||
  Fly   269 WLKSNAISQNMIQRYLSLPTLRDARIAIWTFIAGVLAFLMICGYTGLLIYATYSQCDPLETKLAQ 333

Human   331 AAPDQFVLYFVMDLLKGLPGLPGLFIACLFSGSLSTISSAFNSLATVTMEDLIRPWFPE-FSEAR 394
             ..||.:...|||.|...|||||:|:|.:||.:||::|:..|||:.|.:||.::.:... .:|.:
  Fly   334 -RNDQLLPLLVMDTLGSYPGLPGVFVAGVFSAALSSLSTGLNSLSAVVLEDFVKTFRKSPLTEGQ 397

Human   395 AIMLSRGLAFGYGLLCLGMAYISSQMGPVLQAAISIFGMVGGPLLGLFCLGMFFPCANPPGAVVG 459
            ...:.|.:...:|::.:.:.:...::|.|||..|::..:..|||||:|..|:..|..|..||::|
  Fly   398 TAFVMRSVVVVFGIIFVALVFAVEKLGAVLQLTITLSSVANGPLLGIFTAGVMLPWVNSKGALLG 462

Human   460 LLAGLVMAFWIGI--------GSIV------TSMGS--SMPPSPSNGSSFSLPTNLTVATVTTLM 508
            ..:.|::..|:.:        |.:|      ::||.  :....|...:|.:|...::        
  Fly   463 GFSSLIVMAWMCVSAQRDLVTGDLVYKRKPYSTMGCNYTFAGEPREFASLALDGAIS-------- 519

Human   509 PLTTFSKPTGLQRFYSLSYLWYSAHNSTTVIVVGLIVSLLTGRMRGRSLNPATIYPVLPKLLSLL 573
                 |.|:...:.|.:|||:::...:...|||.|:.|||........::...:.|.:.:.|   
  Fly   520 -----SVPSAPFQLYRISYLYFTLFGALVTIVVALVTSLLLRETDLDGVDTRLLTPFVRRWL--- 576

Human   574 PLSCQKRLHCRS 585
                ::|.|.||
  Fly   577 ----ERRRHRRS 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC5A6NP_066918.2 SLC5sbd_SMVT 24..550 CDD:271394 173/557 (31%)
rumpelNP_572397.1 SLC5sbd_NIS-SMVT 16..554 CDD:271383 170/552 (31%)

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