DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC5A6 and Slc5a6

DIOPT Version :10

Sequence 1:NP_066918.2 Gene:SLC5A6 / 8884 HGNCID:11041 Length:635 Species:Homo sapiens
Sequence 2:NP_570102.1 Gene:Slc5a6 / 170551 RGDID:69648 Length:634 Species:Rattus norvegicus


Alignment Length:631 Identity:528/631 - (83%)
Similarity:564/631 - (89%) Gaps:2/631 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     6 STSAPLSPTSGTSVGMSTFSIMDYVVFVLLLVLSLAIGLYHACRGWGRHTVGELLMADRKMGCLP 70
            ||:||...||.|:..:||||::|||||.|||||||.|||||||||||||||||||||||||||||
  Rat     5 STAAPSYTTSDTNRVISTFSVVDYVVFGLLLVLSLVIGLYHACRGWGRHTVGELLMADRKMGCLP 69

Human    71 VALSLLATFQSAVAILGVPSEIYRFGTQYWFLGCCYFLGLLIPAHIFIPVFYRLHLTSAYEYLEL 135
            |||||||||||||||||.|:||||||||||||||.||||||||||||||||||||||||||||||
  Rat    70 VALSLLATFQSAVAILGGPAEIYRFGTQYWFLGCSYFLGLLIPAHIFIPVFYRLHLTSAYEYLEL 134

Human   136 RFNKTVRVCGTVTFIFQMVIYMGVVLYAPSLALNAVTGFDLWLSVLALGIVCTVYTALGGLKAVI 200
            ||||.||:|||||||||||:||||.|||||||||||||||||||||||||||.:|||||||||||
  Rat   135 RFNKAVRICGTVTFIFQMVVYMGVALYAPSLALNAVTGFDLWLSVLALGIVCNIYTALGGLKAVI 199

Human   201 WTDVFQTLVMFLGQLAVIIVGSAKVGGLGRVWAVASQHGRISGFELDPDPFVRHTFWTLAFGGVF 265
            ||||||||:||||||.|||||:|||||||.|||||||||.|||.|||||||||||||||||||||
  Rat   200 WTDVFQTLIMFLGQLVVIIVGAAKVGGLGHVWAVASQHGLISGIELDPDPFVRHTFWTLAFGGVF 264

Human   266 MMLSLYGVNQAQVQRYLSSRTEKAAVLSCYAVFPFQQVSLCVGCLIGLVMFAYYQEYPMSIQQAQ 330
            |||||||||||||||||||.:|||||||||||||.|||:||:.|||||||||||::|.||.||.|
  Rat   265 MMLSLYGVNQAQVQRYLSSHSEKAAVLSCYAVFPCQQVALCMSCLIGLVMFAYYKKYSMSPQQEQ 329

Human   331 AAPDQFVLYFVMDLLKGLPGLPGLFIACLFSGSLSTISSAFNSLATVTMEDLIRPWFPEFSEARA 395
            |||||.||||||||||.:|||||||:|||||||||||||||||||||||||||:||||:.:|.||
  Rat   330 AAPDQLVLYFVMDLLKDMPGLPGLFVACLFSGSLSTISSAFNSLATVTMEDLIQPWFPQLTETRA 394

Human   396 IMLSRGLAFGYGLLCLGMAYISSQMGPVLQAAISIFGMVGGPLLGLFCLGMFFPCANPPGAVVGL 460
            |||||.|||.|||:||||||:||.:|.|||||:|||||||||||||||||||||||||.||:|||
  Rat   395 IMLSRSLAFAYGLVCLGMAYVSSHLGSVLQAALSIFGMVGGPLLGLFCLGMFFPCANPLGAIVGL 459

Human   461 LAGLVMAFWIGIGSIVTSMGSSMPPSPSNGSSFSLPTNLTVATVTTLMPLTTFSKPTGLQRFYSL 525
            |.||.|||||||||||:.|.|:....|.||||..||:|||||||||||| :|.|||||||:||||
  Rat   460 LTGLTMAFWIGIGSIVSRMSSAAASPPLNGSSSFLPSNLTVATVTTLMP-STLSKPTGLQQFYSL 523

Human   526 SYLWYSAHNSTTVIVVGLIVSLLTGRMRGRSLNPATIYPVLPKLLSLLPLSCQKRLHCRSYGQD- 589
            ||||||||||||||.||||||||||.||||||||.||||||||||:||||||||||..||:.|| 
  Rat   524 SYLWYSAHNSTTVIAVGLIVSLLTGGMRGRSLNPGTIYPVLPKLLALLPLSCQKRLCWRSHNQDI 588

Human   590 HLDTGLFPEKPRNGVLGDSRDKEAMALDGTAYQGSSSTCILQETSL 635
            .:.|.|||||..||.|.||||||.||.||..:|..|.|.|:|||||
  Rat   589 PVVTNLFPEKMGNGALQDSRDKERMAEDGLVHQPCSPTYIVQETSL 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC5A6NP_066918.2 SLC5sbd_SMVT 24..550 CDD:271394 457/525 (87%)
Slc5a6NP_570102.1 SLC5-6-like_sbd 23..548 CDD:444915 457/525 (87%)

Return to query results.
Submit another query.