DRSC/TRiP Functional Genomics Resources

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Protein Alignment FUBP1 and mub

DIOPT Version :10

Sequence 1:XP_016858228.1 Gene:FUBP1 / 8880 HGNCID:4004 Length:688 Species:Homo sapiens
Sequence 2:NP_001246875.1 Gene:mub / 40436 FlyBaseID:FBgn0262737 Length:573 Species:Drosophila melanogaster


Alignment Length:607 Identity:135/607 - (22%)
Similarity:200/607 - (32%) Gaps:185/607 - (30%)


- Green bases have known domain annotations that are detailed below.


Human   133 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLL--------DQIV 189
            ||.|||:.||.::|.::|||.||.|:  .|..|||...::||..::.||..|:        .|..
  Fly    35 VGSIIGKKGEIVNRFREESGAKINIS--DGSCPERIVTVSGTTNAIFSAFTLITKKFEEWCSQFN 97

Human   190 EKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADK 254
            :.|:.        |.......:::|||:.|.:|||.|..||::::..|..:.:..:...|: .::
  Fly    98 DVGKV--------GKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNS-TER 153

Human   255 PLRITGDPYKVQQA-KEMVLELIRD--QGGFREVR------------NEYGSRIGGNEGIDV--- 301
            .:.::|...::.|. .::.|.::..  :|.....|            |.....|.||..:..   
  Fly   154 AVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQET 218

Human   302 ----PIPRFAVGIVIGRNG---EMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEI 359
                |:.....|:..|.:|   .::|      |..:|     |..|.....:...||..::....
  Fly   219 CPVFPLALATGGLHAGISGLADPLLK------GAHLQ-----GAIPAHHHHLQQMPDVAKNPLAS 272

Human   360 ITDL-LRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSI 423
            :..| |..:...:.||.........|.|          .|:....|.....|.||||||..|..|
  Fly   273 LAALGLAGMNPASTGGINHTANPANRAQ----------QQQHEMTVSNDLIGCIIGKGGTKIAEI 327

Human   424 SQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIG-GPVNPLGPPVPHGPHGVP 487
            .|.|||.|.:............:..||.|.|..:..|:.||...:. ...|.|            
  Fly   328 RQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKANLL------------ 380

Human   488 GPHGPPGPPGPGTPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQQQAPPDPAKAGTD 552
                                               ....:.|..|.|       |.|..|.||..
  Fly   381 -----------------------------------EQAQSQQNGGAA-------AAPGAAAAGVA 403

Human   553 PNSAAWAAYYAHYYQQQAQPPPAAPAGAPTT-TQTNGQG-------------DQQNPAPAG---- 599
            ..:.|.|             |.:|..||.|| |.|:|.|             :..|||..|    
  Fly   404 AVTGAAA-------------PTSATNGAITTVTLTSGTGVVGAGAAGAAGVANGANPAANGGGSN 455

Human   600 ----QVDYTKAWEEYYKKMGQAVPAPTGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPP 660
                ...|..|      ..|||.....|..|                 ||..|.:||..     .
  Fly   456 GTISATGYASA------NGGQATNGSVGVNP-----------------AAAAALSSPLA-----S 492

Human   661 APQCLPRPSTLGSAAKSTSAED 682
            |.|.|.:|..| ||..:.||.|
  Fly   493 ALQLLTKPGAL-SALSNLSALD 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FUBP1XP_016858228.1 KH-I_FUBP1_rpt1 119..193 CDD:411906 24/67 (36%)
KH-I_FUBP1_rpt2 207..276 CDD:411909 15/69 (22%)
KH-I_FUBP1_rpt3 297..364 CDD:411912 12/77 (16%)
KH-I_FUBP1_rpt4 397..468 CDD:411915 23/70 (33%)
DUF1897 623..>643 CDD:462653 2/19 (11%)
mubNP_001246875.1 KH-I_PCBP_rpt1 26..92 CDD:411866 23/58 (40%)
KH-I_PCBP_rpt2 107..177 CDD:411806 15/70 (21%)
KH-I_PCBP_rpt3 301..371 CDD:411867 23/69 (33%)

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