DRSC/TRiP Functional Genomics Resources

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Protein Alignment FUBP1 and Psi

DIOPT Version :10

Sequence 1:XP_016858228.1 Gene:FUBP1 / 8880 HGNCID:4004 Length:688 Species:Homo sapiens
Sequence 2:NP_995862.1 Gene:Psi / 36889 FlyBaseID:FBgn0014870 Length:797 Species:Drosophila melanogaster


Alignment Length:777 Identity:243/777 - (31%)
Similarity:326/777 - (41%) Gaps:233/777 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    11 SSGSAGGGGGGGGGGGVNDAFKDALQRARQIAAKIGGDAGTSLNSNDYGYGGQKRPLEDGDGSWT 75
            ||||.||||||||.||.  :...|:.:|..:||::...||||..                     
  Fly    82 SSGSGGGGGGGGGPGGA--SITQAIAQAAAVAARLAASAGTSCE--------------------- 123

Human    76 SPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGTQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGR- 139
                                                            |:.::|:.:.|..:|| 
  Fly   124 ------------------------------------------------EQIRLPESVAGAFMGRS 140

Human   140 GGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEK------------G 192
            ..:.|:.||.|||.|:|:..|.    :|..||.|..::|...:.::..:..:            .
  Fly   141 SNDTITHIQAESGVKVQVMQDQ----DRVIMLRGQRDTVTKGREMIQNMANRAGGGQVEVLLTIN 201

Human   193 RPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLR 257
            .|.|| ..|..|   .||||||.:|.||||||||:|||||||:.|.||::||||| |....||||
  Fly   202 MPPPG-PSGYPP---YQEIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGP-NQELIKPLR 261

Human   258 ITGDPYKVQQAKEMVLELI-------RDQG-------------GFREVRNEYGSRIGGNEGIDVP 302
            |:|:..|::.||:|||:||       :.||             ||....|.     .|.|..:|.
  Fly   262 ISGEAQKIEHAKQMVLDLIAQKDAQGQQQGGRGGGGGGGGPGMGFNNFNNG-----NGGESTEVF 321

Human   303 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGTTPERIAQITGPPDRCQHAAEIITDLL 364
            :|:.|||:|||:.|:||:|||.:.|.::||   |.|:  ..:|...|.|...:...|...|..|:
  Fly   322 VPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDE--MGDRRCVIQGTRQQVDDAKRTIDGLI 384

Human   365 RSV-------QAGNPGGPGPGGRGRGRGQGNWNMG-----PPGGLQEFNFIVPTGKTGLIIGKGG 417
            .:|       :.||.||.||||   ..|..|:..|     ..||.:|..|:||..|.|::||:||
  Fly   385 ENVMQRNGMNRNGNGGGGGPGG---DSGNSNYGYGYGVNHAQGGREEITFLVPASKCGIVIGRGG 446

Human   418 ETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQLIEEKIGGPVNPLG-PPVPH 481
            ||||.|:|||||..|:.||  .:..||.|||..:||..|::.|||:|.|||...:|.:. .|:..
  Fly   447 ETIKLINQQSGAHTEMDRN--ASNPPNEKLFKSKGTTDQVEAARQMISEKINMELNVISRKPIGG 509

Human   482 GPHGVPGPHG-----------PPGPPGPGTPMG--PYNPAPYNPGPPGPAPHGPPAPYAPQGWGN 533
            ||.|..|..|           ..|..|.....|  |.:.|.|...|.|       .||..|||. 
  Fly   510 GPGGGGGNSGGGQNNSHHNQQQGGYGGQNQMQGGDPNSGAGYQQQPWG-------GPYGQQGWD- 566

Human   534 AYPHWQQQ---------APPDPAKAGTDPNSAAWAAYY--------AHYYQQQAQPPPAAPAGAP 581
              |..|||         :....|..|.| .||.|..||        |...:||.:...|..:..|
  Fly   567 --PSGQQQQMAMANQGGSAAGGASGGQD-YSAQWIEYYKQMGCHREAEMIEQQMKAKQAGGSSGP 628

Human   582 TTTQTNGQGDQQNP----APAGQVDYTKAWEEYYKKMGQ-----------------------AVP 619
            ...|...|..|...    |.||..||:..|.|||:.:|:                       :.|
  Fly   629 VQQQQPQQQQQSQQQTGGAGAGGADYSAQWAEYYRSVGKIEEAEAIEKTLKNKQQNGSGGQSSTP 693

Human   620 APT-GAPPGGQPDYSAAWA------------------EYYRQQAAYYAQTS-----PQGMPQ 657
            .|: |.....||:.:||.|                  ..|.|.:.|||..:     |||.||
  Fly   694 NPSQGGSGQQQPNPAAAAAAAAAAAAAAGGYGQSMTPTQYAQYSQYYAAAAAAGGQPQGAPQ 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FUBP1XP_016858228.1 KH-I_FUBP1_rpt1 119..193 CDD:411906 19/86 (22%)
KH-I_FUBP1_rpt2 207..276 CDD:411909 43/68 (63%)
KH-I_FUBP1_rpt3 297..364 CDD:411912 25/69 (36%)
KH-I_FUBP1_rpt4 397..468 CDD:411915 36/70 (51%)
DUF1897 623..>643 CDD:462653 7/37 (19%)
PsiNP_995862.1 KH_1 123..184 CDD:459630 19/133 (14%)
KH-I_FUBP_rpt2 214..280 CDD:411825 43/66 (65%)
KH-I_FUBP_rpt3 317..384 CDD:411826 24/68 (35%)
KH-I_FUBP_rpt4 428..494 CDD:411827 35/67 (52%)
DUF1897 591..619 CDD:462653 9/28 (32%)
DUF1897 <653..680 CDD:462653 7/26 (27%)

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