DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ARHGEF7 and trio

DIOPT Version :10

Sequence 1:XP_047286678.1 Gene:ARHGEF7 / 8874 HGNCID:15607 Length:874 Species:Homo sapiens
Sequence 2:NP_651960.2 Gene:trio / 43974 FlyBaseID:FBgn0024277 Length:2263 Species:Drosophila melanogaster


Alignment Length:1086 Identity:215/1086 - (19%)
Similarity:385/1086 - (35%) Gaps:312/1086 - (28%)


- Green bases have known domain annotations that are detailed below.


Human     3 SAEQTVTWLITLGVLESPKKTISDPEGFLQASLKDGVVLCRLLERLLPGTIEKVYPEPRSESEC- 66
            |.:.|..|...:...|...|.::....|    .|....:|.:|:     ::|:.|  .|.:..| 
  Fly   978 SDDVTKKWQQLVTYAEERHKLVTASINF----YKTAEQVCSVLD-----SLEREY--KREDDWCD 1031

Human    67 --------------LSNIRE----FLRGCGASLR-LETF-----DANDLYQ------GQNFNKVL 101
                          :|..:|    ||:.|..:.| .|||     .:...||      |...:|:.
  Fly  1032 GGGGSDKAQAIVQLISKHQEQKEAFLKACTLARRTAETFLKYANRSQQCYQYKGNCEGHVKSKLD 1096

Human   102 SSLVTLNKVTADIGLGSDSV--C------ARPSSHRIKSFDSLGSQSLHTR----------TSKL 148
            ..|...|:|.....|...|:  |      .|.:...|:...:.|...|.:|          |..|
  Fly  1097 KLLTQENQVLDYWTLRKKSLDQCQQFVLFERSAKQAIEWIHNTGEAYLSSRSNLVGISKEETEGL 1161

Human   149 FQ--GQYRSLDMTDNSNNQLVVRAKFNFQQTNEDELSFSKGDVIHVTRVEEGGWWEGTLNGRTGW 211
            .:  .::||.........:|:::.        .|.| ..||.. |.:.:::   |..:::.|...
  Fly  1162 LKEHNEFRSTAKETRERVKLLIQL--------ADSL-VEKGHA-HASDIKQ---WVASVDQRYKD 1213

Human   212 FPS---NYVREVKAS--------------EKPVSPKSGTLKSPP--------KGFDTTAINKS-- 249
            |.:   :|..:::.|              ...:|..||...|.|        ...:...||:.  
  Fly  1214 FSNRMDSYCEQLEKSLGMSQQQLLLGSDGNSSISSSSGDRHSDPTLEAKLNSSNKENKEINEEKR 1278

Human   250 ----YYNVVLQNILETENEYSKELQTVLSTYLRPLQTSEKLSSANI---SYLMGNLEEICSF-QQ 306
                ....::..:::||..|..:|.|.:..:|...:..:.:.||.|   ..:.||::||..| |:
  Fly  1279 KSARRKEFIMAELMQTERAYVNDLATCIKCFLEEFRAGKSVPSALIGQEDVIFGNIKEIHHFHQK 1343

Human   307 MLVQSLEECTKLPEAQQRVGGCFLNLMPQMKTLYLTYCANHPSAVNVLTEHS----EELGEFMET 367
            :.::.||:...:||   .||.||:....:. .:|:.||.|.|::.|:|.:|.    |||...:| 
  Fly  1344 IFLRELEKYETMPE---DVGHCFVTWASKF-DMYVHYCKNKPTSNNLLVQHGGSFFEELQRRLE- 1403

Human   368 KGASSPGILVLTTGLSKPFMRLDKYPTLLKELERHMEDYHTDRQDIQKSMAAFKNLSAQCQE--- 429
              ...|    |...|.||..|:.||..|||:|....|:.|   .:|::.:....|:..:..:   
  Fly  1404 --VDHP----LPAYLIKPVQRITKYQLLLKDLLSCCEESH---GEIKEGLEVMLNVPKKANDAMH 1459

Human   430 ----------VRKRKELELQILTEAIRNWEGDDIKTLGNVTYMSQVLIQCAGSEEKNERYLLLFP 484
                      |.|..|:.||   :|.:.|:...|...|                  .||.:.|| 
  Fly  1460 LSLLENCDVSVDKLGEVVLQ---DAFQAWDTKQIIRKG------------------RERRVFLF- 1502

Human   485 NVLLMLSASPRMSGFI---YQGKLPTTGMTITK-LEDSENHRNAFEISGSMIE--RILVSCNNQQ 543
            .:.|:.:...:.|..:   ::.||.||.|.||: :|..|.....:.....|:.  ||::...:.:
  Fly  1503 ELYLLFAKEVKESNVVKYQFKSKLMTTDMGITEHIEGDETKFAVWTGRSPMLSDCRIVLKATSLE 1567

Human   544 DLQEWVEHLQKQTKVTSVGNPTIKPHSVPSHTLPSHPVTPSSKHADSK-------PAPLTPAYHT 601
            ..|.||:.|::..:.|.....::        |||..|    :||:.|.       ...||...|.
  Fly  1568 TKQIWVKKLREVMQETCFSGTSL--------TLPKSP----AKHSGSSQRSSRDLDEQLTENDHD 1620

Human   602 LPHPSHHGTPHTT----------------------------INWGP----LEPPKTPKP------ 628
            ....:..|:.:||                            ::.|.    :|||...:|      
  Fly  1621 RCSLASFGSGNTTDSDNKLGNQEATWVVADYIATSGSNELSVSKGQQVEIVEPPTAGEPDFCLVR 1685

Human   629 --------------WSLSCLRPAP-------PLRPSAALCYKEVRS--LDHSNSQMTD-LSKSPK 669
                          ..:|.|:|.|       ....:||......:|  .|.||....| ||.|.|
  Fly  1686 LNPQHDDAAVQEGLVPVSVLKPPPGSHKHGSGTAANAASSAGSQKSDMQDQSNRSKADALSSSTK 1750

Human   670 -----------------TMKKLLPKRKP-ERKPSDEEFASRKSTAALEEDAQILKVIEAYCTSAK 716
                             |.|.  |..|| .:|||::...:.:..|....:.|..:...:..|...
  Fly  1751 RRGFSGRNWLPLMNRKGTDKP--PSSKPLVKKPSEKNLRTPQKHAEELAEQQNQQPGASPATVLP 1813

Human   717 TRQTLNSTWQ---------------GTDL-------MHNHVLADDD----QPSLDSLGRRSSLSR 755
            :.|..:||..               |.:|       ...|::|:..    :.:.:|.|..:|..:
  Fly  1814 SSQFPSSTQHPGGAGAGDYEPDEEVGLELPPPMKPIQEPHLIANGPPAFAKDAKESSGNMASPGK 1878

Human   756 LEPSDLSEDSDYDSIWTAHSYRMGSTSRSRKESAPQVLLPEEEKIIVEETKSNGQTVIEEKSLVD 820
            ::.:.|||..:           :..|:..:.||..:|    :....||...:||.....:.: .:
  Fly  1879 MDGNPLSEIEE-----------IVKTTTEQHESNSRV----DGGGGVENASTNGHGRSHDNN-DE 1927

Human   821 TVYALKDEVQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLKNMND 866
            :..|:.|:...|::......:.:..|:...:||.::|...:..:|:
  Fly  1928 SHTAVSDKAAALKKRQCVFAELMSTEEAYVQDLHEIVNGYMTEINN 1973

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ARHGEF7XP_047286678.1 CH_betaPIX 3..115 CDD:409115 29/142 (20%)
RhoGEF67_u1 117..163 CDD:465201 11/65 (17%)
SH3_betaPIX 167..220 CDD:212994 9/55 (16%)
RhoGEF 251..428 CDD:238091 51/184 (28%)
PH_Cool_Pix 459..557 CDD:269932 22/103 (21%)
PHA03247 <564..647 CDD:223021 24/148 (16%)
RhoGEF67_u2 617..719 CDD:465200 31/153 (20%)
betaPIX_CC 789..873 CDD:465158 13/78 (17%)
trioNP_651960.2 SEC14 13..152 CDD:214706
SPEC 314..>468 CDD:238103
SPEC 563..778 CDD:238103
SPEC 782..997 CDD:238103 4/18 (22%)
SPEC 897..1119 CDD:238103 31/151 (21%)
SPEC 1125..1226 CDD:197544 19/113 (17%)
RhoGEF 1287..1455 CDD:459876 51/181 (28%)
PH1_Kalirin_Trio_like 1462..1584 CDD:270060 31/143 (22%)
SH3_Kalirin_1 1643..1707 CDD:212786 7/63 (11%)
RhoGEF 1945..2121 CDD:459876 5/29 (17%)
PH2_Kalirin_Trio_p63RhoGEF 2130..2260 CDD:270061
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.