DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCKBR and sNPF-R

DIOPT Version :10

Sequence 1:NP_001350481.1 Gene:CCKBR / 887 HGNCID:1571 Length:516 Species:Homo sapiens
Sequence 2:NP_524176.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster


Alignment Length:479 Identity:121/479 - (25%)
Similarity:194/479 - (40%) Gaps:135/479 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    60 LYAVIFLMSVGGNMLIIVVLGLSRRLRTVTNAFLLSLAVSDLLLAVACMPFTLLPNLMGTFIFGT 124
            |||.:|::.|.||:|:..|:..:|.::||||.|:.:||:||:||.|..:|||.|...||.:.||.
  Fly    69 LYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRWAFGR 133

Human   125 VICKAVSYLMGVSVSVSTLSLVAIALERYSAICRPLQARVWQTRSHAARVIVATWLLSGLLMVPY 189
            .:|..||:..|.|:.:|||:|.:||::||..|..|...|:  ..|....:||:.|:::.|..|||
  Fly   134 SLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRM--KLSTCIGIIVSIWVIALLATVPY 196

Human   190 PVYTVVQPVGPRVLQCVHRWPSARVRQTWSVLLLLLLFFIPGVVMAVAYGLISRELYLGLRFDGD 254
            .:|          ::..:...:.  .||.:..|:.....:.|..:|...|.|..           
  Fly   197 GMY----------MKMTNELVNG--TQTGNETLVEATLMLNGSFVAQGSGFIEA----------- 238

Human   255 SDSDSQSRVRNQGGLPGGAGPR--------EQNLGEAELWRATGPAGVGGTEMKVRVRRKLEMEL 311
            .||.|.::...|....|..||.        |:|      |.:.....|.|.     :...|:..|
  Fly   239 PDSTSATQAYMQVMTAGSTGPEMPYVRVYCEEN------WPSEQYRKVFGA-----ITTTLQFVL 292

Human   312 SWERRSGGDWAGDWGDSPFSLTAHPLCSGAVHQNGRCRPETGAVGEDSDGCYVQLPRSRPALELT 376
                             ||.:.:.                          |||.:     :::|.
  Fly   293 -----------------PFFIISI--------------------------CYVWI-----SVKLN 309

Human   377 ALTAPGPGS-GSRPTQAKLLAKKRVVRMLLVIVVLFFLCWLPVY----------SANTWRAFDGP 430
            ......||| .||..:|....|||..|||:.:|.:|.|.|||:.          .:|.||.:   
  Fly   310 QRARAKPGSKSSRREEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKSNEWRFY--- 371

Human   431 GAHRALSGAPISFI---HLLSYASACVNPLVYCFMHRRFRQACLETCARCCPRPPRARPRALPDE 492
                      |.|.   |.::.:|.|.||.:|.:::..||               :.....||..
  Fly   372 ----------ILFFFVAHSIAMSSTCYNPFLYAWLNENFR---------------KEFKHVLPCF 411

Human   493 DPPTPSIASLSR-LSYTTISTLGP 515
            :|...:|.:::| .:.:..:|.||
  Fly   412 NPSNNNIINITRGYNRSDRNTCGP 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKBRNP_001350481.1 7tm_GPCRs 55..470 CDD:475119 113/431 (26%)
TM helix 1 57..81 CDD:320645 9/20 (45%)
TM helix 2 90..112 CDD:320645 11/21 (52%)
TM helix 3 128..150 CDD:320645 9/21 (43%)
TM helix 4 173..189 CDD:320645 5/15 (33%)
TM helix 5 216..239 CDD:320645 5/22 (23%)
TM helix 6 401..423 CDD:320645 9/31 (29%)
TM helix 7 438..463 CDD:320645 8/27 (30%)
sNPF-RNP_524176.1 7tmA_NPYR-like 64..404 CDD:320331 113/446 (25%)
TM helix 1 65..91 CDD:320331 9/21 (43%)
TM helix 2 98..123 CDD:320331 13/24 (54%)
TM helix 3 136..166 CDD:320331 13/29 (45%)
TM helix 4 177..198 CDD:320331 7/20 (35%)
TM helix 5 278..307 CDD:320331 9/81 (11%)
TM helix 6 329..359 CDD:320331 12/29 (41%)
TM helix 7 372..397 CDD:320331 8/24 (33%)

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