DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCKBR and AstC-R1

DIOPT Version :10

Sequence 1:NP_001350481.1 Gene:CCKBR / 887 HGNCID:1571 Length:516 Species:Homo sapiens
Sequence 2:NP_649040.2 Gene:AstC-R1 / 40020 FlyBaseID:FBgn0036790 Length:483 Species:Drosophila melanogaster


Alignment Length:485 Identity:106/485 - (21%)
Similarity:180/485 - (37%) Gaps:167/485 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    58 ITLYAVIFLMSVGGNMLIIVVLGLSRRLRTVTNAFLLSLAVSDLLLAVACMPFTLLPNLMGTFIF 122
            :.||..:.::.:.||.|:|.|:....:::||||.::|:|||:|....:. :||.|....:.::.|
  Fly    81 VVLYGFVCIIGLFGNTLVIYVVLRFSKMQTVTNIYILNLAVADECFLIG-IPFLLYTMRICSWRF 144

Human   123 GTVICKAVSYLMGVSVS--VSTLSLVAIALERYSAICRPLQARVWQTRSHAARVIVA-TWLLSGL 184
            |..:|||  |::..|::  .|::.|:.::.:||.|:|.|:.:..::| .|.|:|:.| .|..|.:
  Fly   145 GEFMCKA--YMVSTSITSFTSSIFLLIMSADRYIAVCHPISSPRYRT-LHIAKVVSAIAWSTSAV 206

Human   185 LMVPYPVY--TVVQPVGPRVLQCVHRWPSARVRQTWSVLLLLLLFFIPGVVMAVAYGLISRELYL 247
            ||:|..:|  ||.|..|.. ..|...||.|..:.:.:..:|...|                   |
  Fly   207 LMLPVILYASTVEQEDGIN-YSCNIMWPDAYKKHSGTTFILYTFF-------------------L 251

Human   248 GLRFDGDSDSDSQSRVRNQGGLPGGAGPREQNLGEAELWRATGPAGVGGTEMKVRVRRKLEMELS 312
            |.                                                               
  Fly   252 GF--------------------------------------------------------------- 253

Human   313 WERRSGGDWAGDWGDSPFSLTAHPLCSGAVHQNGRCRPETGAVGEDSDGCYVQLPRSRPALELTA 377
                                 |.|||                           ...|...|.:..
  Fly   254 ---------------------ATPLC---------------------------FILSFYYLVIRK 270

Human   378 LTAPGPGSGSRPTQAKLLAKKRVVRMLLVIVVLFFLCWLPVYSANTWRAFDGPGAHRALSGAPIS 442
            |.:.||..|:: ::.|..|.::|.|::|.::.::.|||||.:.:........| |.|.||...|.
  Fly   271 LRSVGPKPGTK-SKEKRRAHRKVTRLVLTVISVYILCWLPHWISQVALIHSNP-AQRDLSRLEIL 333

Human   443 FIHLLS---YASACVNPLVYCFMHRRFRQACLE--TC-------ARCCPRP---------PRARP 486
            ...||.   |:::.|||::|.|:...||::..:  ||       |:....|         .|...
  Fly   334 IFLLLGALVYSNSAVNPILYAFLSENFRKSFFKAFTCMNKQDINAQLQLEPSVFTKQGSKKRGGS 398

Human   487 RALPDEDPPTPSIASL----SRLSYTTIST 512
            :.|...:|..|.:..|    :..|.||.||
  Fly   399 KRLLTSNPQIPPLLPLNAGNNNSSTTTSST 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCKBRNP_001350481.1 7tm_GPCRs 55..470 CDD:475119 92/419 (22%)
TM helix 1 57..81 CDD:320645 7/22 (32%)
TM helix 2 90..112 CDD:320645 8/21 (38%)
TM helix 3 128..150 CDD:320645 6/23 (26%)
TM helix 4 173..189 CDD:320645 6/16 (38%)
TM helix 5 216..239 CDD:320645 2/22 (9%)
TM helix 6 401..423 CDD:320645 7/21 (33%)
TM helix 7 438..463 CDD:320645 9/27 (33%)
AstC-R1NP_649040.2 7tmA_AstC_insect 78..364 CDD:320222 92/419 (22%)
TM helix 1 79..105 CDD:320222 7/23 (30%)
TM helix 2 112..138 CDD:320222 10/26 (38%)
TM helix 3 149..179 CDD:320222 10/31 (32%)
TM helix 4 191..213 CDD:320222 9/21 (43%)
TM helix 5 241..270 CDD:320222 10/158 (6%)
TM helix 6 287..317 CDD:320222 9/29 (31%)
TM helix 7 332..357 CDD:320222 9/24 (38%)

Return to query results.
Submit another query.