Protein Alignment LDB1 and Chi

DIOPT Version :9

• Sequence 1: NP_001106878.1
• Gene: LDB1 / 8861
• HGNCID: 6532
• Length: 411
• Species: Homo sapiens
• Sequence 2: NP_726403.2
• Gene: Chi / 37837
• FlyBaseID: FBgn0013764
• Length: 596
• Species: Drosophila melanogaster
• Alignment Length: 397
• Identity: 237/397 - (59%)
• Similarity: 291/397 - (73%)
• Gaps: 21/397 - (5%)

Human     8 PGCSSKSFKLYSPKEPPNGNAFPPFHPGTMLDRDVGPTPMYPPTYLE---PGIGRHTPYGNQTDY 69
            |..|.::....||.....|..|.|..|.:..........|..|..:|   .|..||..|.:.|::
  Fly   173 PFNSGQAGHFSSPTVFSVGGQFNPMPPASPFGHGGNHPMMGGPQQMERIDQGFRRHNSYFSHTEH 237

Human    70 RIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEG 134
            |:||||||||...||.||.|||:||||||||||.|||.|||||||||||||||||||:||||:||
  Fly   238 RVFELNKRLQQRNEESDNCWWDSFTTEFFEDDARLTILFCLEDGPKRYTIGRTLIPRFFRSIYEG 302

Human   135 GATELYYVLKHPKEAFHSNFVSLDCDQGSMVTQHGKPMFTQVCVEGRLYLEFMFDDMMRIKTWHF 199
            |.::||:.|||.||:||:..::|||||.:::||||||.||:||.:.||.||||:||.||||:||.
  Fly   303 GVSDLYFQLKHAKESFHNTSITLDCDQCTVITQHGKPFFTKVCADARLILEFMYDDYMRIKSWHM 367

Human   200 SIRQHRELIPRSILAMH-AQDPQMLDQLSKNITRCGLSNSTLNYLRLCVILEPMQELMSRHKTYS 263
            :|:.||||||||::... ..||.:|||::|||||.|::||||||||||||||||||||||||.|:
  Fly   368 TIKGHRELIPRSVIGTSLPPDPMLLDQITKNITRAGITNSTLNYLRLCVILEPMQELMSRHKAYA 432

Human   264 LSPRDCLKTCLFQKWQRMVAPPAEPTRQQ-PSKRRKRKMSGGSTMSSGGGNTNNS---NSKKKSP 324
            |||||||||.||||||||||||.:...|: |:||||||.|     :|||||.:|:   .::|:||
  Fly   433 LSPRDCLKTTLFQKWQRMVAPPGKKDPQRPPNKRRKRKGS-----NSGGGNNSNTPPVTNQKRSP 492

Human   325 AS-TFALSSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGI--DDEDSFN--NSPAL 384
            :. :|:||||  ||||||||||||||||:|||||||||||||:|..|.:  |:...|.  :||..
  Fly   493 SGPSFSLSSQ--DVMVVGEPTLMGGEFGEEDERLITRLENTQYDGTNAVEHDNHTGFGHADSPIS 555

Human   385 GANSPWN 391
            |:| ||:
  Fly   556 GSN-PWS 561

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
LDB1	NP_001106878.1	LIM_bind	70..271	CDD:396393	144/201 (72%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	283..330		22/51 (43%)
		LID	336..364	CDD:407766	26/27 (96%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	367..411		10/29 (34%)
Chi	NP_726403.2	LIM_bind	238..440	CDD:280051	144/201 (72%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C165146279
Domainoid	1	1.000	243	1.000	Domainoid score	I2214
eggNOG	1	0.900	-	-		E1_KOG2181
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	460	1.000	Inparanoid score	I1571
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0002757
OrthoInspector	1	1.000	-	-		otm42033
orthoMCL	1	0.900	-	-		OOG6_105360
Panther	1	1.100	-	-	O	PTHR10378
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3240
SonicParanoid	1	1.000	-	-		X1842
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
User_Submission	0	0.000	Not matched by this tool.
	13	12.780