DRSC/TRiP Functional Genomics Resources

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Protein Alignment ALKBH1 and CG17807

DIOPT Version :10

Sequence 1:NP_006011.2 Gene:ALKBH1 / 8846 HGNCID:17911 Length:389 Species:Homo sapiens
Sequence 2:NP_611690.2 Gene:CG17807 / 37585 FlyBaseID:FBgn0034748 Length:615 Species:Drosophila melanogaster


Alignment Length:322 Identity:66/322 - (20%)
Similarity:111/322 - (34%) Gaps:107/322 - (33%)


- Green bases have known domain annotations that are detailed below.


Human     5 AAAVGSVATLATEPGEDAFRKLFRFYRQSRPGTADLEGVIDFSAAHAARGKGPGAQKVIKSQLNV 69
            ||..|.|..:...||     |.:.|:.     .|.||                .:|.:.:...|:
  Fly    64 AATGGKVIQVVMLPG-----KSYCFFI-----CASLE----------------DSQLIYEGMHNI 102

Human    70 SSVSEQN--AYRAGLQPV------SKWQAYGLKGYPGFIFIPNPFLPGYQWHWVKQCLKLYSQKP 126
            |::.:|.  ||.:.::.:      |:|.    |..|..:.|...|                    
  Fly   103 STIGQQGAVAYLSYIRQLPALAGKSEWN----KPLPRGLHIIADF-------------------- 143

Human   127 NVCNLDKHMSKEETQDLWEQSKEFLRYKEATKRRPRSLLEKLRWVTVGYHYNWDSKKYSADHYTP 191
                    :::||...|.....|..|..|.|    .||  |.|.|.   |:.::. .|..::..|
  Fly   144 --------VTEEEESTLLRAIGEDGRTSEVT----GSL--KHRNVK---HFGFEF-LYGTNNVDP 190

Human   192 FPSDLGFLSEQVAAACG-----FEDFRA-------EAGILNYYRLDSTLGIHVDRSELDHS---K 241
            ...    |.:.:.:||.     ...|.:       :...:|.|.....:..|||    .||   .
  Fly   191 SKP----LEQSIPSACDILWPRLNSFASTWDWSSPDQLTVNEYEPGHGIPPHVD----THSAFLD 247

Human   242 PLLSFSFGQSAIFLLGGLQRDEAPTAMFMHSGDIMIMSGFSRL-LNHAV-PR---VLPNPEG 298
            |:||.|. ||.:.:  ..:|.:....:.:....::||||.:|. ..|.: |:   |:|:..|
  Fly   248 PILSLSL-QSDVVM--DFRRGDDQVQVRLPRRSLLIMSGEARYDWTHGIRPKHIDVVPSASG 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ALKBH1NP_006011.2 tRNA-binding. /evidence=ECO:0000305|PubMed:27745969 86..389 49/233 (21%)
alkb 119..289 CDD:129659 39/185 (21%)
CG17807NP_611690.2 RRM_ALKBH8 40..119 CDD:409865 17/80 (21%)
2OG-FeII_Oxy 136..322 CDD:473886 45/220 (20%)
UbiE 368..498 CDD:441828
Blue background indicates that the domain is not in the aligned region.

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