DRSC/TRiP Functional Genomics Resources

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Protein Alignment ALKBH1 and AlkB

DIOPT Version :10

Sequence 1:NP_006011.2 Gene:ALKBH1 / 8846 HGNCID:17911 Length:389 Species:Homo sapiens
Sequence 2:NP_996458.1 Gene:AlkB / 2768870 FlyBaseID:FBgn0065035 Length:332 Species:Drosophila melanogaster


Alignment Length:340 Identity:123/340 - (36%)
Similarity:184/340 - (54%) Gaps:31/340 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    23 FRKLFRFYRQSRPGTADLEGVIDFSAAHAARGKGPGAQKV---IKSQLNVSSVSEQNAYRAGLQP 84
            |:.:|:.|: .:..:.||..|:.......   ||...:|.   |..:|::|:| |......|::.
  Fly     2 FKLVFKQYK-CKSTSPDLTEVVKIDDCVV---KGNDQEKSDNNIVQRLSISNV-ESLQTMPGVKS 61

Human    85 VSKWQAYGLKGYPGFIFIPNPFLPGYQWHWVKQCLKLYSQKPNVCNLDKHMSKEETQ-DLWEQ-- 146
            ...|:.|.|..:||.|.|.|||....:.:|..:||:.:.:.||:.||::.:..|..: |.|:|  
  Fly    62 PKDWRTYTLTNHPGIIVIRNPFSERGRRYWSARCLRDFPRTPNIVNLNERLFDESVRSDWWKQLN 126

Human   147 ----SKEFLRYKEATKRRPRSLLEKLRWVTVGYHYNWDSKKYSADHYTPFPSDLGFLSEQVAAAC 207
                ..||.|.|.|           :||.|.|||:|||:|.|..:..:|||.||..|....|.|.
  Fly   127 LCSDGVEFQRIKSA-----------MRWTTFGYHHNWDTKIYDEEMQSPFPEDLSSLCGLFAQAL 180

Human   208 GFEDFRAEAGILNYYRLDSTLGIHVDRSELDHSKPLLSFSFGQSAIFLLGGLQRDEAPTAMFMHS 272
            |:.||:.||.|:|||.:.|||..|.|.||.:.|.||.||||||:||||:||...:|.|||:::.|
  Fly   181 GYADFKPEAAIVNYYPVGSTLSGHTDHSEPNKSAPLFSFSFGQTAIFLIGGRSLEEKPTAIYLQS 245

Human   273 GDIMIMSGFSRLLNHAVPRVLPNPEGEGLPHCLE----APLPA-VLPRDSMVEPCSMEDWQVCAS 332
            ||:|||||.|||..|||||::.......|...:|    |.:.. .:.:|...:..:.:.|:..:.
  Fly   246 GDVMIMSGESRLCYHAVPRIIKTQASATLSLIIEDVDNADIKTRTIDKDLFHDVGNPQFWEPFSR 310

Human   333 YLKTARVNMTVRQVL 347
            |:..:|:|:.:||||
  Fly   311 YMDDSRININIRQVL 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ALKBH1NP_006011.2 tRNA-binding. /evidence=ECO:0000305|PubMed:27745969 86..389 108/274 (39%)
alkb 119..289 CDD:129659 80/176 (45%)
AlkBNP_996458.1 2OG-FeII_Oxy_2 75..267 CDD:433285 92/202 (46%)

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