DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDKL1 and cdkl1

DIOPT Version :9

Sequence 1:XP_005268214.1 Gene:CDKL1 / 8814 HGNCID:1781 Length:358 Species:Homo sapiens
Sequence 2:NP_001003773.1 Gene:cdkl1 / 445316 ZFINID:ZDB-GENE-040808-34 Length:350 Species:Danio rerio


Alignment Length:358 Identity:276/358 - (77%)
Similarity:314/358 - (87%) Gaps:9/358 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVN 66
            |||||||.|||||||||||||||:|||||||||||:||||||:||||||||||||||||||||||
Zfish     1 MEKYEKISKIGEGSYGVVFKCRNKDTGQIVAIKKFVESEDDPIIKKIALREIRMLKQLKHPNLVN 65

Human    67 LLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPE 131
            |:|||||||:|||||||||||||:|||||.||||||:||||.||||||||||||.||||||||||
Zfish    66 LMEVFRRKRKLHLVFEYCDHTVLNELDRYPRGVPEHMVKSIIWQTLQAVNFCHKQNCIHRDVKPE 130

Human   132 NILITKHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAEL 196
            |||||||.|||||||||||:||||.|||||.|||||||:||||||||||||||||||:|||||||
Zfish   131 NILITKHQVIKLCDFGFARILTGPCDYYTDCVATRWYRAPELLVGDTQYGPPVDVWAVGCVFAEL 195

Human   197 LSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPA 261
            |||.||||||||||||||||||||:|||||||||||||:||||.:|:|::|||||||:||:||.|
Zfish   196 LSGAPLWPGKSDVDQLYLIRKTLGELIPRHQQVFSTNQFFSGVCVPEPQEMEPLELKYPNLSYQA 260

Human   262 LGLLKGCLHMDPTQRLTCEQLLHHPYFENIR-EIEDLAKEHNKPTRKTLRKSRKHHCFTETSKLQ 325
            |.|:||||.|||.:||:|||||..|||:::| |.|.:.:|.::  :|..|:.|||      ....
Zfish   261 LSLMKGCLRMDPAERLSCEQLLEQPYFDSLREESESVTRELDR--KKRTRQPRKH------LPPG 317

Human   326 YLPQLTGSSILPALDNKKYYCDTKKLNYRFPNI 358
            |||||..|::.||::|::.|.:.:|.||..|||
Zfish   318 YLPQLASSTVFPAVENRRNYNNLRKFNYHLPNI 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDKL1XP_005268214.1 STKc_CDKL1_4 3..288 CDD:270837 248/284 (87%)
cdkl1NP_001003773.1 STKc_CDKL1_4 2..287 CDD:270837 248/284 (87%)
Pkinase 4..287 CDD:278497 246/282 (87%)
[NKR]KIAxRE 45..51 5/5 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..318 8/32 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194329359
Domainoid 1 1.000 534 1.000 Domainoid score I2318
eggNOG 1 0.900 - - E1_KOG0593
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55805
Inparanoid 1 1.050 579 1.000 Inparanoid score I5525
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG52261
OrthoDB 1 1.010 - - D245642at7742
OrthoFinder 1 1.000 - - FOG0004639
OrthoInspector 1 1.000 - - oto47499
orthoMCL 1 0.900 - - OOG6_101283
Panther 1 1.100 - - LDO PTHR24056
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3254
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
1818.270

Return to query results.
Submit another query.