DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDKL1 and cka1

DIOPT Version :10

Sequence 1:NP_004187.3 Gene:CDKL1 / 8814 HGNCID:1781 Length:357 Species:Homo sapiens
Sequence 2:NP_593642.1 Gene:cka1 / 2541972 PomBaseID:SPAC23C11.11 Length:332 Species:Schizosaccharomyces pombe


Alignment Length:322 Identity:95/322 - (29%)
Similarity:158/322 - (49%) Gaps:62/322 - (19%)


- Green bases have known domain annotations that are detailed below.


Human     2 EKYEKIGKIGEGSYGVVFKCRN--RDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK-HPNL 63
            :.||.|.|:|.|.|..||:..|  .::..|:.:.|       ||..|...|||::|:.|. .||:
pombe    41 DNYEIIRKVGRGKYSEVFEGLNVLNNSKCIIKVLK-------PVKYKKIKREIKILQNLAGGPNI 98

Human    64 VNLLEVFR--RKRRLHLVFEYCDH----TVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC 122
            ::||::.|  ..:...|:||:.|:    |:...|..|.       ::..:::.|:|::|||....
pombe    99 ISLLDIVRDPESKTPSLIFEFVDNIDFRTLYPTLSDYD-------IRYYSYELLKALDFCHSRGI 156

Human   123 IHRDVKPENILIT-KHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRSPELLVGDTQYGPPVDVW 186
            :||||||.|::|. |...::|.|:|.|.......:|.. .||:|:::.|||||...:|...:|:|
pombe   157 MHRDVKPHNVMIDHKKRKLRLIDWGLAEFYHAGMEYNV-RVASRYFKGPELLVDFREYDYSLDIW 220

Human   187 AIGCVFAELL-SGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLE 250
            :.|.:||.|: .....:.|:.:.|||..|.|.||.     .::|:..|.:..|          |:
pombe   221 SFGVMFAALIFKKDTFFRGRDNYDQLVKIAKVLGT-----DELFAYVQKYQIV----------LD 270

Human   251 LKFPNI--SYP-------------------ALGLLKGCLHMDPTQRLTCEQLLHHPYFENIR 291
            .::.||  .||                   |:.||...|..|..:||||::.:.||||:.::
pombe   271 RQYDNILGQYPKRDWYSFVNRDNRSLANDEAIDLLNRLLRYDHQERLTCQEAMAHPYFQVLK 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDKL1NP_004187.3 STKc_CDKL1_4 2..287 CDD:270837 93/316 (29%)
[NKR]KIAxRE 45..51 1/5 (20%)
cka1NP_593642.1 STKc_CK2_alpha 24..329 CDD:271034 94/317 (30%)

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