DRSC/TRiP Functional Genomics Resources

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Protein Alignment GALR2 and npr-9

DIOPT Version :9

Sequence 1:NP_003848.1 Gene:GALR2 / 8811 HGNCID:4133 Length:387 Species:Homo sapiens
Sequence 2:NP_001361821.1 Gene:npr-9 / 191320 WormBaseID:WBGene00013974 Length:431 Species:Caenorhabditis elegans


Alignment Length:396 Identity:125/396 - (31%)
Similarity:192/396 - (48%) Gaps:85/396 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    26 VIVPLLFALIFLVGTVGNTLVLAVLLRGGQAVSTTNLFILNLGVADLCFILCCVPFQATIYTLDG 90
            :|:|.:||:|.|||.|||.||:.|.. |.|..::||..|:.|.::||.|:|.||||.|..|....
 Worm    30 IIIPTIFAVIILVGLVGNALVVIVAF-GRQMRNSTNTLIIGLAISDLMFLLLCVPFTAVDYAAPT 93

Human    91 WVFGSLLCKAVHFLIFLTMHASSFTLAAVSLDRYLAIRYPLHSRELRTPRNALAAIGLIWGLSLL 155
            |:|....|..::|....:.:.|.:||..::||||||:.||:.|..||||||.:.|:..|:.:.:.
 Worm    94 WIFPEWTCSMINFFQHTSAYCSVWTLTLMALDRYLAVVYPVESMTLRTPRNTVIALCFIYIIIIA 158

Human   156 -------FSGPYLSYY---RQSQLANLTVCHPAWSAPRRRAMDICTF-VFSYLLPVLVLGLTYAR 209
                   ..|.|:..:   ::|..|.||:. .|.:.|........|| ||.|:||:.:..:.|..
 Worm   159 SQIPVGRMHGIYVYDFIMEKRSTCAILTIA-TAEATPTMARTYFMTFNVFGYVLPLGISVVLYGL 222

Human   210 TLRYLW-------------RAVDPVAAGSGARR------AKRKVTRMILIVAALFCLCWMP---- 251
            .||.||             |.:....:||..||      |||||||::|.|...:.|||:|    
 Worm   223 MLRKLWDMPRPGNSQSVGGRNLTNRDSGSSIRRRPEATAAKRKVTRLVLCVLITWALCWLPLNVC 287

Human   252 --------------HHALILCVWFGQFPLTRATYALRILSHLVSYANSCVNPIVYALVSKHFRKG 302
                          .|.:|:.:             ::|.|.:::|.|||:|||:|||:|:.||:|
 Worm   288 FFMSGLAYPEPLVISHGVIMVI-------------VQIASQVLAYTNSCLNPILYALMSQSFREG 339

Human   303 FRTICAGLLGRAPGRASGRVCAAARG-------TH--------SGSVLE----RESSDLLHMSEA 348
            |..:...|:.:.   :.||.|...|.       ||        :.:|::    ..||.|...|.:
 Worm   340 FIRVMKMLINKL---SRGRFCTNYRRSALRTELTHYNQTPAHPANTVVQVSNGERSSLLKDNSSS 401

Human   349 AGALRP 354
            |.:::|
 Worm   402 ATSVQP 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GALR2NP_003848.1 7tm_4 32..>177 CDD:304433 58/154 (38%)
7tm_1 42..292 CDD:278431 94/297 (32%)
npr-9NP_001361821.1 7tmA_AstA_R_insect 30..340 CDD:320224 109/324 (34%)
TM helix 1 32..56 CDD:320224 13/24 (54%)
TM helix 2 64..86 CDD:320224 11/21 (52%)
TM helix 3 102..124 CDD:320224 4/21 (19%)
TM helix 4 147..163 CDD:320224 2/15 (13%)
TM helix 5 198..221 CDD:320224 7/22 (32%)
TM helix 6 267..289 CDD:320224 8/21 (38%)
TM helix 7 308..333 CDD:320224 12/37 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 134 1.000 Domainoid score I3443
eggNOG 1 0.900 - - E33208_3B9CW
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2863
Inparanoid 1 1.050 170 1.000 Inparanoid score I3155
Isobase 1 0.950 - 0 Normalized mean entropy S5404
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 1 1.000 - - FOG0000972
OrthoInspector 1 1.000 - - otm15108
orthoMCL 1 0.900 - - OOG6_105726
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3950
SonicParanoid 1 1.000 - - X1132
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.710

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