DRSC/TRiP Functional Genomics Resources

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Protein Alignment SUCLG1 and LSC1

DIOPT Version :10

Sequence 1:NP_003840.2 Gene:SUCLG1 / 8802 HGNCID:11449 Length:346 Species:Homo sapiens
Sequence 2:NP_014785.3 Gene:LSC1 / 854310 SGDID:S000005668 Length:329 Species:Saccharomyces cerevisiae


Alignment Length:306 Identity:182/306 - (59%)
Similarity:223/306 - (72%) Gaps:4/306 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    43 YTASRQHLYVDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGGQTHLGLPVFNTVKEA 107
            |..:.::|.:.|:||:|.|||||||||||:..:.||||.:||||.|.|.||||||.|||.:||:|
Yeast    24 YDKTIKNLLLPKDTKVIFQGFTGKQGTFHASISQEYGTNVVGGTNPKKAGQTHLGQPVFASVKDA 88

Human   108 KEQTGATASVIYVPPPFAAAAINEAIEAEIPLVVCITEGIPQQDMVRVKHKLLRQEKTRLIGPNC 172
            .::||||||.|:||||.|||||.|:|||||||.|||||||||.||:.:...|..|:||||:||||
Yeast    89 IKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQDKTRLVGPNC 153

Human   173 PGVINPG-ECKIGIMPGHIHKKGRIGIVSRSGTLTYEAVHQTTQVGLGQSLCVGIGGDPFNGTDF 236
            ||:|||. :.:|||.|..|.:.|:|||:|||||||||||.|||:..|||||.:|:|||.|.||||
Yeast   154 PGIINPATKVRIGIQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSLVIGMGGDAFPGTDF 218

Human   237 IDCLEIFLNDSATEGIILIGEIGGNAEENAAEFLKQHN-SGPNSKPVVSFIAGLTA--PPGRRMG 298
            ||.|::||.|..|||||::|||||.||..||:|||::| |.....||.|||||..|  ..|.|||
Yeast   219 IDALKLFLEDETTEGIIMLGEIGGKAEIEAAQFLKEYNFSRSKPMPVASFIAGTVAGQMKGVRMG 283

Human   299 HAGAIIAGGKGGAKEKISALQSAGVVVSMSPAQLGTTIYKEFEKRK 344
            |:|||:.|....|:.|..||:..||.|..||..||..:..:|.|.|
Yeast   284 HSGAIVEGSGTDAESKKQALRDVGVAVVESPGYLGQALLDQFAKFK 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SUCLG1NP_003840.2 PTZ00187 19..344 CDD:240307 181/304 (60%)
LSC1NP_014785.3 SucD 30..321 CDD:439844 178/290 (61%)

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