DRSC/TRiP Functional Genomics Resources

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Protein Alignment SIGLEC5 and unc-40

DIOPT Version :9

Sequence 1:XP_016882908.1 Gene:SIGLEC5 / 8778 HGNCID:10874 Length:560 Species:Homo sapiens
Sequence 2:NP_491664.1 Gene:unc-40 / 172233 WormBaseID:WBGene00006776 Length:1415 Species:Caenorhabditis elegans


Alignment Length:621 Identity:117/621 - (18%)
Similarity:215/621 - (34%) Gaps:156/621 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    21 YELQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPE 85
            :.::.:::|||.|....|:.||:..........  :.:.|.|||       |:.:.....|:|..
 Worm    43 FVMEPRRNVTVMESSSHLLECSYVLAHERLVHD--VRIEWKRDG-------VLLSERTSSRIKVM 98

Human    86 TQGRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRV------ERGRDVKYSYQQNKLNLEVTALIE 144
            :.|             ||.|......:.|:|...|      ::..|. :::...|..|.: |.:.
 Worm    99 SNG-------------SLWIESVSSAEEGTYQCAVHVTTKSDQTSDT-WTFLSRKATLRL-ADLA 148

Human   145 KPDIHFLE-PLESGRPTRLSCSLPGSCEAGPPLTFSWTGN----------ALSPLDPETTRSSEL 198
            |.::..:: .|..|:||...|.:    .:.|..|..|..|          .:.|:      |:.|
 Worm   149 KFELQAIDRTLAKGQPTAFHCLI----NSKPTPTAVWLHNDEPIVNGGEYHILPV------SNTL 203

Human   199 TLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLNVSYAPQTIT---IFRNGIALEILQNTSYLPVL 260
            .::.....|.....|.::..|.: .:.:|.:|.|:  .:|::   :|.....|::::        
 Worm   204 EISSTQSRHEGTYRCTVEGAGKR-RSSQTARLTVT--TETVSNELVFITTPRLQVVE-------- 257

Human   261 EGQALRLLCDAPSNPPAHLSWFQGSPAL--NATPISNTGILELRRVRSAEE--GGFTCRAQHPLG 321
            :|....|.|...|.....:.|.:.|..:  :...|...|:..:...|::.|  |.:||||.:...
 Worm   258 QGDEFLLECLVASLIRPQVRWLKDSRQIIVDGVRIRRVGVSSILVSRASIEDTGLYTCRASNNDD 322

Human   322 FLQIFLNLSVYSLPQLL---GPSCSWEAEGLHCRC-SFRARPAPSLCWRLEEKPLEGNSSQGSFK 382
            .:...:::.|.:.|::.   ....:.|...:...| :..|||...:.|....:.:.|:.   .|.
 Worm   323 SIDRAVSVEVRAPPRITTRPTTKVAVETADVELECGTAAARPEARVNWYKNGEAIIGSE---YFV 384

Human   383 VNSSSAGPWANSSLILHGGLSSDLKV-SCKAWNIYGSQSGSVLLL----QGRSNLGTGVVP---- 438
            :..        :.|.:.|.:.:|..: .|.|.|..||:..|..||    ...|...:..||    
 Worm   385 IEP--------NRLRILGVVRADQAIYQCIAENDVGSEQASAQLLVDAPDSSSVAASSGVPMTSS 441

Human   439 AALG---------------------GAGVMALLCICLCLIFF---LI-----------CTVLVS- 467
            |.||                     ...:|..      .||:   ||           ...|.| 
 Worm   442 APLGLRSTSSGSRFINVEWDPPVQRNGNIMRY------HIFYKDNLIDRERMINSSSTSATLTSL 500

Human   468 ------FLRVKARRKQAAGRPEKMDD--------EDPIMGTITSGSRKKPWPDSPGDQASPPGDA 518
                  .:||.|..:...|   |..|        |..:.|.:.|.:.....|::...:.|||...
 Worm   501 QPSTMYLIRVTAENEAGMG---KFSDSLKVTTNKEQAVPGKVASLTTTATGPETIDIRWSPPSGG 562

Human   519 PPLEEQKELHYASLSFSEMKSREPKDQEAPSTTEYS 554
            .|....|..:    |...::..|.:.....|||.|:
 Worm   563 QPALRYKIFY----SHDPLEKNEKETLITTSTTHYT 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SIGLEC5XP_016882908.1 None
unc-40NP_491664.1 I-set 42..130 CDD:254352 21/108 (19%)
Ig 43..142 CDD:299845 23/121 (19%)
I-set 149..236 CDD:254352 18/97 (19%)
Ig 158..237 CDD:299845 17/89 (19%)
IG_like 251..332 CDD:214653 16/88 (18%)
IGc2 258..320 CDD:197706 15/61 (25%)
I-set 336..422 CDD:254352 19/96 (20%)
Ig 352..422 CDD:299845 17/80 (21%)
FN3 441..529 CDD:238020 16/96 (17%)
FN3 536..627 CDD:238020 14/63 (22%)
FN3 635..727 CDD:238020
FN3 738..816 CDD:214495
FN3 852..927 CDD:214495
FN3 946..1038 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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