| Sequence 1: | NP_001129125.1 | Gene: | PABPC4 / 8761 | HGNCID: | 8557 | Length: | 660 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_570951.2 | Gene: | Pabpc4 / 230721 | MGIID: | 2385206 | Length: | 660 | Species: | Mus musculus |
| Alignment Length: | 660 | Identity: | 646/660 - (97%) |
|---|---|---|---|
| Similarity: | 653/660 - (98%) | Gaps: | 0/660 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Human 1 MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 65
Human 66 ERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130
Human 131 VCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYI 195
Human 196 KNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKI 260
Human 261 IFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKV 325
Human 326 MLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMR 390
Human 391 ALPANAILNQFQPAAGGYFVPAVPQAQGRPPYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQ 455
Human 456 SGPRPTLRHLAPTGNAPASRGLPTTTQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQ 520
Human 521 NLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQ 585
Human 586 MLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQ 650
Human 651 KVGAVAAATS 660 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| PABPC4 | NP_001129125.1 | PABP-1234 | 11..640 | CDD:130689 | 615/628 (98%) |
| Pabpc4 | NP_570951.2 | PABP-1234 | 11..640 | CDD:130689 | 615/628 (98%) |
| RRM1_I_PABPs | 12..91 | CDD:240824 | 77/78 (99%) | ||
| RRM2_I_PABPs | 97..172 | CDD:240825 | 74/74 (100%) | ||
| RRM3_I_PABPs | 190..269 | CDD:240826 | 72/78 (92%) | ||
| RRM4_I_PABPs | 293..370 | CDD:240827 | 75/76 (99%) | ||
| PABP | 572..639 | CDD:279051 | 66/66 (100%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C83964917 | |
| Domainoid | 1 | 1.000 | 379 | 1.000 | Domainoid score | I12144 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0123 | |
| HGNC | 1 | 1.500 | - | - | ||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H37855 | |
| Inparanoid | 1 | 1.050 | 1243 | 1.000 | Inparanoid score | I4115 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| NCBI | 1 | 1.000 | - | - | ||
| OMA | 1 | 1.010 | - | - | QHG53624 | |
| OrthoDB | 1 | 1.010 | - | - | D1027234at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000294 | |
| OrthoInspector | 1 | 1.000 | - | - | oto116180 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_100425 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR24012 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R14011 |
| SonicParanoid | 1 | 1.000 | - | - | X269 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 18 | 18.300 | |||||