DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RIPK1 and Ripk1

DIOPT Version :10

Sequence 1:XP_047275401.1 Gene:RIPK1 / 8737 HGNCID:10019 Length:712 Species:Homo sapiens
Sequence 2:NP_033094.3 Gene:Ripk1 / 19766 MGIID:108212 Length:656 Species:Mus musculus


Alignment Length:672 Identity:469/672 - (69%)
Similarity:540/672 - (80%) Gaps:17/672 - (2%)


- Green bases have known domain annotations that are detailed below.


Human    42 MQPDMSLNVIKMKSSDFLESAELDSGGFGKVSLCFHRTQGLMIMKTVYKGPNCIEHNEALLEEAK 106
            |||||||:.|||.|||.||..:||||||||||||:||:.|.:|:|.||.|||..|:||.||||.|
Mouse     1 MQPDMSLDNIKMASSDLLEKTDLDSGGFGKVSLCYHRSHGFVILKKVYTGPNRAEYNEVLLEEGK 65

Human   107 MMNRLRHSRVVKLLGVIIEEGKYSLVMEYMEKGNLMHVLKAEMSTPLSVKGRIILEIIEGMCYLH 171
            ||:||||||||||||:|||||.||||||||||||||||||.::..|||:|||||:|.||||||||
Mouse    66 MMHRLRHSRVVKLLGIIIEEGNYSLVMEYMEKGNLMHVLKTQIDVPLSLKGRIIVEAIEGMCYLH 130

Human   172 GKGVIHKDLKPENILVDNDFHIKIADLGLASFKMWSKLNNEEHNELREVDGTAKK-NGGTLYYMA 235
            .||||||||||||||||.||||||||||:||||.||||..|:.|:.:||..|.|| |||||||||
Mouse   131 DKGVIHKDLKPENILVDRDFHIKIADLGVASFKTWSKLTKEKDNKQKEVSSTTKKNNGGTLYYMA 195

Human   236 PEHLNDVNAKPTEKSDVYSFAVVLWAIFANKEPYENAICEQQLIMCIKSGNRPDVDDITEYCPRE 300
            ||||||:|||||||||||||.:|||||||.||||||.||.:|.::||||||||:|::|.||||||
Mouse   196 PEHLNDINAKPTEKSDVYSFGIVLWAIFAKKEPYENVICTEQFVICIKSGNRPNVEEILEYCPRE 260

Human   301 IISLMKLCWEANPEARPTFPGIEEKFRPFYLSQLEESVEEDVKSLKKEYSNENAVVKRMQSLQLD 365
            |||||:.||:|.||.||||.||||:|||||||..||.|||||.||||||.:::.|::||.|||.|
Mouse   261 IISLMERCWQAIPEDRPTFLGIEEEFRPFYLSHFEEYVEEDVASLKKEYPDQSPVLQRMFSLQHD 325

Human   366 CVAVPSSRSNSATEQPGSLHSSQGLGMGPVEESWFAPSLEHPQEENEPSLQSKLQDEANYHLYGS 430
            ||.:|.|||||  ||||||||||||.|||||||||:.|.|:||:||:.|:|:|||:||:||.:|.
Mouse   326 CVPLPPSRSNS--EQPGSLHSSQGLQMGPVEESWFSSSPEYPQDENDRSVQAKLQEEASYHAFGI 388

Human   431 RMDRQTKQQPRQNVAYNREEERRRRVSHDPFAQQRPYENFQNTEGKGTAYSSAASHGNAVHQPSG 495
            ..::|||.|||||.||||||||:||||||||||||..||.::...:|.:..|..|.|.||.|.|.
Mouse   389 FAEKQTKPQPRQNEAYNREEERKRRVSHDPFAQQRARENIKSAGARGHSDPSTTSRGIAVQQLSW 453

Human   496 LTSQPQVLYQNNGLYSSHGFGTRPLDPGTAGPRVWYRPIPSHMPSLHNIPVPETNYLGNTPTMPF 560
            ..:|   ...|||||:.|||       ||.|..|||.|..|.|.|.:..||||||..|:|||||:
Mouse   454 PATQ---TVWNNGLYNQHGF-------GTTGTGVWYPPNLSQMYSTYKTPVPETNIPGSTPTMPY 508

Human   561 SSLPPTDESIKYTIYNSTGIQIGAYNYMEIGGTSSSLLDSTNTNFKEEPAAKYQAIFDNTTSLTD 625
            .|.|..|:.|||||:||:|||||.:|||::|..|    ...|...|||..:::||||||||||||
Mouse   509 FSGPVADDLIKYTIFNSSGIQIGNHNYMDVGLNS----QPPNNTCKEESTSRHQAIFDNTTSLTD 569

Human   626 KHLDPIRENLGKHWKNCARKLGFTQSQIDEIDHDYERDGLKEKVYQMLQKWVMREGIKGATVGKL 690
            :||:|||||||:.|||||||||||:||||||||||||||||||||||||||:||||.||||||||
Mouse   570 EHLNPIRENLGRQWKNCARKLGFTESQIDEIDHDYERDGLKEKVYQMLQKWLMREGTKGATVGKL 634

Human   691 AQALHQCSRIDLLSSLIYVSQN 712
            |||||||.|||||:.||..||:
Mouse   635 AQALHQCCRIDLLNHLIRASQS 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RIPK1XP_047275401.1 STKc_RIP1 64..331 CDD:270929 207/267 (78%)
Death_RIP1 624..709 CDD:260048 74/84 (88%)
Ripk1NP_033094.3 Protein Kinases, catalytic domain 23..291 CDD:473864 207/267 (78%)
Interaction with SQSTM1. /evidence=ECO:0000250|UniProtKB:Q13546 291..567 168/291 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..373 34/47 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 388..423 26/34 (76%)
RIP homotypic interaction motif (RHIM). /evidence=ECO:0000269|PubMed:18442983, ECO:0000269|PubMed:27819681, ECO:0000269|PubMed:27819682 520..536 11/15 (73%)
Death_RIP1 568..653 CDD:260048 74/84 (88%)

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