DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYH13 and LOC100495968

DIOPT Version :9

Sequence 1:NP_003793.2 Gene:MYH13 / 8735 HGNCID:7571 Length:1938 Species:Homo sapiens
Sequence 2:XP_002935256.2 Gene:LOC100495968 / 100495968 -ID:- Length:1941 Species:Xenopus tropicalis


Alignment Length:1940 Identity:1484/1940 - (76%)
Similarity:1705/1940 - (87%) Gaps:2/1940 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSSDAEMAIFGEAAPYLRKPEKERIEAQNRPFDSKKACFVADNKEMYVKGMIQTRENDKVIVKTL 65
            ||.|||||:|||||.:|||.|||||||||:|||:|...::.|...::|||.|..|:.||:.|||.
 Frog     1 MSGDAEMAVFGEAASFLRKSEKERIEAQNKPFDAKNTVYIDDTNTLFVKGFITARDGDKITVKTE 65

Human    66 DDRMLTLNNDQVFPMNPPKFDKIEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYK 130
            |.|..|:...|::..||||:||||||||||||:||:||:|||||||||||||||||||:||||||
 Frog    66 DGRTETVTESQIYQQNPPKYDKIEDMAMMTHLNEPSVLFNLKERYAAWMIYTYSGLFCITVNPYK 130

Human   131 WLPVYKPEVVAAYRGKKRQEAPPHIFSISDNAYQFMLTDRDNQSILITGESGAGKTVNTKRVIQY 195
            |||||.|||||.||||||.|||||||||||||||.|||||:|||:||||||||||||||||||||
 Frog   131 WLPVYNPEVVAGYRGKKRVEAPPHIFSISDNAYQSMLTDRENQSVLITGESGAGKTVNTKRVIQY 195

Human   196 FATIAVTGDK-KKETQPGKMQGTLEDQIIQANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGATGK 259
            |||:|..||. ||:.....::||||||||||||||||||||||:|||||||||||||||||.|||
 Frog   196 FATVAAIGDAGKKKQADNNLKGTLEDQIIQANPLLEAFGNAKTLRNDNSSRFGKFIRIHFGTTGK 260

Human   260 LASADIETYLLEKSRVTFQLSSERSYHIFYQIMSNKKPELIDLLLISTNPFDFPFVSQGEVTVAS 324
            |:|||||||||||||||||||:||||||||||::||.||||::||::|||:|:|.:||||:.|.|
 Frog   261 LSSADIETYLLEKSRVTFQLSAERSYHIFYQILTNKIPELIEMLLLTTNPYDYPTISQGELKVKS 325

Human   325 IDDSEELLATDNAIDILGFSSEEKVGIYKLTGAVMHYGNMKFKQKQREEQAEPDGTEVADKAGYL 389
            |||.:|.:||::||::|||::||:|.|||:||||||:||||||||||||||||||||||||..||
 Frog   326 IDDEDEFMATESAIEVLGFNAEERVSIYKMTGAVMHHGNMKFKQKQREEQAEPDGTEVADKISYL 390

Human   390 MGLNSAEMLKGLCCPRVKVGNEYVTKGQNVQQVTNSVGALAKAVYEKMFLWMVTRINQQLDTKQP 454
            ||||||::||.||.||||||||:|||.|.|.||.||||||.|:||||:|||||||||||||||||
 Frog   391 MGLNSADLLKALCYPRVKVGNEFVTKSQTVPQVCNSVGALCKSVYEKLFLWMVTRINQQLDTKQP 455

Human   455 RQYFIGVLDIAGFEIFDFNSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDL 519
            ||:||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
 Frog   456 RQFFIGVLDIAGFEIFDFNSLEQLCINFTNEKLQQFFNHHMFVQEQEEYKKEGIEWEFIDFGMDL 520

Human   520 AACIELIEKPMGIFSILEEECMFPKATDTSFKNKLYDQHLGKSNNFQKPKPAKGKAEAHFSLVHY 584
            |||||||||||||||||||||||||||:||||||||:|||||..||:||||.|||||||||||||
 Frog   521 AACIELIEKPMGIFSILEEECMFPKATETSFKNKLYEQHLGKCKNFEKPKPGKGKAEAHFSLVHY 585

Human   585 AGTVDYNIAGWLDKNKDPLNETVVGLYQKSSLKLLSFLFSNYAGAETGDSGGSKKGG-KKKGSSF 648
            ||.|||||:|||||||||||::||.||||||:||||||:|:||.|::|....||.|| |||||||
 Frog   586 AGIVDYNISGWLDKNKDPLNDSVVQLYQKSSVKLLSFLYSSYASADSGSDSSSKGGGKKKKGSSF 650

Human   649 QTVSAVFRENLNKLMTNLRSTHPHFVRCLIPNETKTPGVMDHYLVMHQLRCNGVLEGIRICRKGF 713
            ||||||||||||||||||||||||||||||||||||||:||:||::|||||||||||||||.|||
 Frog   651 QTVSAVFRENLNKLMTNLRSTHPHFVRCLIPNETKTPGIMDNYLIIHQLRCNGVLEGIRICTKGF 715

Human   714 PSRILYADFKQRYRILNASAIPEGQFIDSKNASEKLLNSIDVDREQFRFGNTKVFFKAGLLGLLE 778
            ||||.|.||||||:||||||||:|||||||.|:||||.|||||..|:|||:|||||||||||.||
 Frog   716 PSRIQYGDFKQRYKILNASAIPDGQFIDSKKAAEKLLGSIDVDHNQYRFGHTKVFFKAGLLGTLE 780

Human   779 EMRDEKLVTLMTSTQAVCRGYLMRVEFKKMMERRDSIFCIQYNIRSFMNVKHWPWMNLFFKIKPL 843
            |||||.|..::|..|:.|||||||:|||||..||:::|.||||:||||||||||||.|:||||||
 Frog   781 EMRDEMLAHVITRIQSYCRGYLMRIEFKKMNSRREALFVIQYNLRSFMNVKHWPWMKLYFKIKPL 845

Human   844 LKSAEAEKEMATMKEDFERTKEELARSEARRKELEEKMVSLLQEKNDLQLQVQSETENLMDAEER 908
            |||||.|||||.:||::|:.||.|.::|||:||||||||.||||||||.||.|:|:|.|.|||||
 Frog   846 LKSAETEKEMANIKEEYEKIKEALEKAEARKKELEEKMVVLLQEKNDLMLQAQAESETLADAEER 910

Human   909 CEGLIKSKILLEAKVKELTERLEEEEEMNSELVAKKRNLEDKCSSLKRDIDDLELTLTKVEKEKH 973
            ||.|||.||.||:|:||:|||||:|||.|:||.||||.|||:||.||:|||:||:||:|||||||
 Frog   911 CESLIKGKIQLESKIKEMTERLEDEEESNAELSAKKRKLEDECSELKKDIDELEITLSKVEKEKH 975

Human   974 ATENKVKNLSEEMTALEENISKLTKEKKSLQEAHQQTLDDLQVEEDKVNGLIKINAKLEQQTDDL 1038
            |||||||||:|:|.||::||||:|||||||||||||||||||.||||||.|.|..:|||||.|||
 Frog   976 ATENKVKNLTEDMAALDDNISKVTKEKKSLQEAHQQTLDDLQTEEDKVNTLSKAKSKLEQQVDDL 1040

Human  1039 EGSLEQEKKLRADLERAKRKLEGDLKMSQESIMDLENDKQQIEEKLKKKEFELSQLQAKIDDEQV 1103
            |||||||||||.||||.|||||.|||::||:::|.||||||.||:||||::|:|||.:||:|||.
 Frog  1041 EGSLEQEKKLRLDLERTKRKLECDLKLTQETVLDFENDKQQAEERLKKKDYEISQLLSKIEDEQA 1105

Human  1104 HSLQFQKKIKELQARIEELEEEIEAEHTLRAKIEKQRSDLARELEEISERLEEASGATSAQIEMN 1168
            .|.|.||||||||||.||||||||||.|:|||.||||:.:.|||||||||||||.|||:.|||||
 Frog  1106 LSSQLQKKIKELQARTEELEEEIEAERTVRAKAEKQRALITRELEEISERLEEAGGATAVQIEMN 1170

Human  1169 KKREAEFQKMRRDLEEATLQHEATAATLRKKQADSVAELGEQIDNLQRVKQKLEKEKSELKMEID 1233
            ||||.||||||||||||.|:||..|..||||.||:|||||||:|||||:||||||||||||||||
 Frog  1171 KKRENEFQKMRRDLEEANLRHETIACNLRKKHADTVAELGEQLDNLQRIKQKLEKEKSELKMEID 1235

Human  1234 DMASNIEALSKSKSNIERTCRTVEDQFSEIKAKDEQQTQLIHDLNMQKARLQTQNGELSHRVEEK 1298
            |.|||::..||.|:|.|:....:|||.||.|||.|:|.:|::||...||||.::|||||.:.|||
 Frog  1236 DFASNLDNTSKLKANFEKLNHVLEDQLSEAKAKGEEQQRLLNDLTTHKARLLSENGELSRQGEEK 1300

Human  1299 ESLISQLTKSKQALTQQLEELKRQMEEETKAKNAMAHALQSSRHDCDLLREQYEEEQEAKAELQR 1363
            |||||||::.|||..||:||||||:|||||||||:|||:||:||||||||||:|||||||:||||
 Frog  1301 ESLISQLSRGKQAFIQQIEELKRQLEEETKAKNALAHAVQSARHDCDLLREQFEEEQEAKSELQR 1365

Human  1364 ALSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQEAEENTETANSKCASLEKTKQRLQGE 1428
            :|||||:||:|||.||||||||||||||||||||||.|||||:.....|||||||||||||||.|
 Frog  1366 SLSKANNEVSQWRNKYETDAIQRTEELEEAKKKLAQHLQEAEDQVAAVNSKCASLEKTKQRLQSE 1430

Human  1429 VEDLMRDLERSHTACATLDKKQRNFDKVLAEWKQKLDESQAELEAAQKESRSLSTELFKMRNAYE 1493
            |:|||.|:|||:.|.|.||||||||||||.|||||..|.|||||||.||.||||||:||||||||
 Frog  1431 VDDLMIDVERSNNAAAALDKKQRNFDKVLVEWKQKYGEGQAELEAALKECRSLSTEIFKMRNAYE 1495

Human  1494 EVVDQLETLRRENKNLQEEISDLTEQIAETGKNLQEAEKTKKLVEQEKSDLQVALEEVEGSLEHE 1558
            |.::..|||:|||||||:||:||||.|.|:||::.|.:|.:|.|||:|:::|.||||.|||||||
 Frog  1496 EALELTETLKRENKNLQQEITDLTEHIGESGKSINELDKARKQVEQQKNEMQAALEEAEGSLEHE 1560

Human  1559 ESKILRVQLELSQVKSELDRKVIEKDEEIEQLKRNSQRAAEALQSVLDAEIRSRNDALRLKKKME 1623
            |:|.||:||||:|||||:|:|:.||||||||||||:|||.:.||:.||:||||||:|||||||||
 Frog  1561 ETKFLRIQLELNQVKSEMDKKIAEKDEEIEQLKRNNQRATDTLQTTLDSEIRSRNEALRLKKKME 1625

Human  1624 GDLNEMEIQLGHSNRQMAETQKHLRTVQGQLKDSQLHLDDALRSNEDLKEQLAIVERRNGLLLEE 1688
            |||||:||||..:|||.||.||.||.||.|.||:.|.||:..|...|||||:|::|||..|.|.|
 Frog  1626 GDLNELEIQLNQANRQAAEAQKQLRNVQTQNKDTLLQLDNKERIESDLKEQIAVLERRTALQLAE 1690

Human  1689 LEEMKVALEQTERTRRLSEQELLDASDRVQLLHSQNTSLINTKKKLEADIAQCQAEVENSIQESR 1753
            :||::.|||..:|:.:::||||.|:|:|:|||.|.||||.|:|||||:|::|.|:|||.||||:|
 Frog  1691 IEEIRAALEMLDRSCKVAEQELADSSERLQLLRSHNTSLTNSKKKLESDVSQLQSEVEESIQEAR 1755

Human  1754 NAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQK 1818
            |.||||||||||||:|||||||||||||||.|||||||||||||||||||||||||||||||:||
 Frog  1756 NTEEKAKKAITDAALMAEELKKEQDTSAHLVRMKKNLEQTVKDLQHRLDEAEQLALKGGKKQLQK 1820

Human  1819 LENRVRELENELDVEQKRGAEALKGAHKYERKVKEMTYQAEEDHKNILRLQDLVDKLQAKVKSYK 1883
            ||.|||||||||:.|||||.||:||..||||::||:|||.|||.||:|||||||||||.|||:||
 Frog  1821 LETRVRELENELENEQKRGVEAVKGVRKYERRMKELTYQNEEDRKNVLRLQDLVDKLQLKVKAYK 1885

Human  1884 RQAEEAEEQANTQLSRCRRVQHELEEAAERADIAESQVNKLRAKSRDVGSQKMEE 1938
            |||||||||||..::|.|::||||.||.||||||:||||||||||||:||:|..|
 Frog  1886 RQAEEAEEQANAHMARYRKMQHELGEAEERADIADSQVNKLRAKSRDIGSKKDSE 1940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYH13NP_003793.2 Myosin_N 36..73 CDD:280832 14/36 (39%)
Myosin_head 88..770 CDD:278492 573/683 (84%)
MYSc_Myh13 100..770 CDD:276887 562/671 (84%)
Actin-binding. /evidence=ECO:0000250 659..681 21/21 (100%)
Actin-binding. /evidence=ECO:0000250 761..775 12/13 (92%)
Myosin_tail_1 850..1927 CDD:279860 793/1076 (74%)
RILP-like <1273..1399 CDD:304877 98/125 (78%)
TMPIT 1744..>1837 CDD:285135 83/92 (90%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1917..1938 16/20 (80%)
LOC100495968XP_002935256.2 Myosin_N 38..72 CDD:280832 13/33 (39%)
Myosin_head 88..772 CDD:278492 573/683 (84%)
MYSc_class_II 100..772 CDD:276951 562/671 (84%)
Myosin_tail_1 852..1929 CDD:279860 793/1076 (74%)
Uso1_p115_C 902..1007 CDD:282695 79/104 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D12270at7742
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45615
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X58
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.