DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GBF1 and Efa6

DIOPT Version :9

Sequence 1:XP_006718110.1 Gene:GBF1 / 8729 HGNCID:4181 Length:1893 Species:Homo sapiens
Sequence 2:NP_001163691.2 Gene:Efa6 / 42665 FlyBaseID:FBgn0051158 Length:1601 Species:Drosophila melanogaster


Alignment Length:676 Identity:143/676 - (21%)
Similarity:265/676 - (39%) Gaps:175/676 - (25%)


- Green bases have known domain annotations that are detailed below.


Human   583 SNL----FEELTKLLSKNAFPVSGQLYTTHLLSLDALLTVIDSTEAHCQAKVLNSLTQQEKKETA 643
            ||:    :::...|||..  .:.|.:..:.....|:.:.|.|:. ||.:.::...|..|::::..
  Fly   994 SNISSPDYQDDDNLLSSR--DILGGMVLSDPSDSDSTILVSDAA-AHQRQQLKQQLRAQQQQQRE 1055

Human   644 RPSCEIVDGTREASNTERTASDGKAV----GMASDIPGLHLPGGGRLPPEHGKSGCSDLEEAVDS 704
            |         ....:.:|..|:.|.|    |:.|:..|    |.|    .:|:|     ||.|.:
  Fly  1056 R---------ERDRDRDREQSEHKVVIQVRGLDSNSSG----GNG----TNGRS-----EEDVVT 1098

Human   705 GADKKFA--------RKPPRFSCLLPDPRELIEIKNKKKLLITGTEQFNQKPKKGIQFLQEKGLL 761
            ..|:...        ..||     :.|....:|          ....::..||            
  Fly  1099 LTDEPLGTMTVGMRDASPP-----VSDDGSDVE----------SLHSYHYSPK------------ 1136

Human   762 TIPMDNT-EVAQWLRENPRLDKKMIGEFVSDRKNID----LLESFVSTFSFQGLRLDEALRLYLE 821
            .:.|.:. .:|:.|.......|..:...:|  ||.|    :.:.::..|:|:...||:|||.:|:
  Fly  1137 AVDMPSAIRLAKRLHSLDGFKKSDVSRHLS--KNNDFSRAVADEYLKHFTFEKKSLDQALREFLQ 1199

Human   822 AFRLPGEAPVIQRLLEAFTERWMNCNGSPFANSDACFSLAYAVIMLNTDQHNHNVRKQNAPMTLE 886
            .|.|.||....:|:|..|::|:::||...|.:.||..:|..|:::||||.|..|:   |..|:..
  Fly  1200 QFSLSGETQERERVLVHFSKRFLDCNPGTFNSQDAVHTLTCAIMLLNTDLHGQNI---NRKMSCA 1261

Human   887 EFRKNLKGVNGGKDFEQDILEDMYHAIKNE--EIVMPEEQTGLVRENYVWNVLLHRGATPEGIFL 949
            ||..||..:|.|::|.:|:|:.:|.|||.:  |..:.||...|.::....:.|.:.|..|   ||
  Fly  1262 EFVDNLADLNDGENFPKDVLKSLYQAIKTKPLEWALDEEAGDLQQQRANNSALGNVGLNP---FL 1323

Human   950 RVPTASYDLDLFTMTWGPTIAALSY---------VFDKSLEET-------------------IIQ 986
            ..|      :|.|        |:.|         .:|.|.::|                   .:.
  Fly  1324 DPP------ELAT--------AVEYKKGYVMRKCCYDSSFKKTPFGKRSWKMFYCTLRDLVLYLH 1374

Human   987 KAISGFRKCAM-------ISAHYGLSDVFDNLIISLCKFTALSSESIENLPSVFGSNPKAHIAA- 1043
            |...||||..|       |..|:.|:...::.......|...:::..|.|   |.::....:.: 
  Fly  1375 KDEHGFRKSQMSDNLHNAIRIHHALATKANDYTKKQHVFRLQTADQAEYL---FQTSDSKELQSW 1436

Human  1044 -KTVFHLAHRHGDILREGWKNIMEAMLQLFRAQLLP--KAMIEVEDFVDPNGKISLQREETPSNR 1105
             :|:.::.........||.....:.    |:..|||  ::.:.:::.:|.: ::.|.:.:...|.
  Fly  1437 VETINYVCAAISAPPLEGGVGSQKR----FQRPLLPSKQSKLMLKEQLDSH-EVQLAQLDQELNE 1496

Human  1106 GESTVLSFVSWLTLSGPEQSSVRGPSTENQEAKRVALE-------CIKQCDPEKMITESKFLQLE 1163
            .:            .||..|  :|.:.:|.:.|...|:       ........||:.:.:.|:|:
  Fly  1497 HK------------KGPIPS--KGLALQNYKEKESYLQYELRRYRTYVSILSAKMLADQQQLELQ 1547

Human  1164 SLQELMKALVSVTPDEETYDEEDAAF 1189
            :.|          |...:::||...|
  Fly  1548 AQQ----------PSPASHEEEADTF 1563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBF1XP_006718110.1 Sec7_N 434..579 CDD:289549
Sec7 733..918 CDD:279680 54/191 (28%)
Efa6NP_001163691.2 PDZ_signaling 7..85 CDD:238492
PHA03269 225..>344 CDD:165527
Sec7 1124..1293 CDD:238100 55/195 (28%)
PH_EFA6 1330..1452 CDD:270107 20/132 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5307
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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