DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GBF1 and step

DIOPT Version :10

Sequence 1:XP_006718110.1 Gene:GBF1 / 8729 HGNCID:4181 Length:1893 Species:Homo sapiens
Sequence 2:NP_001036375.2 Gene:step / 35425 FlyBaseID:FBgn0086779 Length:727 Species:Drosophila melanogaster


Alignment Length:374 Identity:106/374 - (28%)
Similarity:176/374 - (47%) Gaps:83/374 - (22%)


- Green bases have known domain annotations that are detailed below.


Human   594 SKNAFPVSGQLYTTHLLSLDALLTVIDSTEAHCQAKVLNSLTQQEKKETARPS------------ 646
            |||:.|....        :|.:..:.||:.:..::: .||...:..|.|::.:            
  Fly   283 SKNSLPPPPY--------IDDMRFIDDSSNSQSESE-RNSNIHKTNKYTSKNNNNDSKRESQQSN 338

Human   647 -CE----IVDGTREASNTERTASDGKAVGMASDIPGLHLPGGGRLPPEHGKSGCSDL---EEAVD 703
             ||    ::|  |...|||:  ||...:              .|.|.:..|....::   .||:|
  Fly   339 LCESCRMLLD--RNYINTEQ--SDNLVI--------------LRRPSKQIKDELCEVVSEMEALD 385

Human   704 SGADKKFARKPPRFSCLLPDPRELIEIKNKKKLLITGTEQFNQKPKKGIQFLQEKGLLTIPMDNT 768
            ...|.|.:                    ||.|.:..|.::||..|||||::|.|..||.  .|..
  Fly   386 VPEDCKHS--------------------NKDKQMSIGRKKFNMDPKKGIEYLVENRLLR--HDPQ 428

Human   769 EVAQWLRENPRLDKKMIGEFVSDRK--NIDLLESFVSTFSFQGLRLDEALRLYLEAFRLPGEAPV 831
            :||.:|.:...|:|..||:::.::.  |.|:|::||:...|..|.|.:|||.:|.:|||||||..
  Fly   429 DVAHFLYKGEGLNKTAIGDYLGEKNDFNEDVLKAFVALHDFTNLILVQALRQFLWSFRLPGEAQK 493

Human   832 IQRLLEAFTERWMNCNGSPFANSDACFSLAYAVIMLNTDQHNHNVRKQNAPMTLEEFRKNLKGVN 896
            |.|::|.|.:|:...|...|.|:|.|:.|::|:|||||..||.:|:.:   .|:::|....:|:|
  Fly   494 IDRMMETFAQRYCQLNPDIFTNTDTCYVLSFAIIMLNTSLHNPSVKDK---PTVDQFISMNRGIN 555

Human   897 GGKDFEQDILEDMYHAIKNEEIVMPEEQTGLVRENYVWNVLLHRGATPE 945
            .|.|..:.:||.:|.:|:.|...:|::.         .|.|:|....|:
  Fly   556 NGGDLPRGLLESLYESIRTEPFKIPQDD---------GNDLMHTFFNPD 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBF1XP_006718110.1 PLN03076 <463..>1212 CDD:215560 106/374 (28%)
Sec7 733..918 CDD:460178 72/186 (39%)
PHA03247 <1828..1891 CDD:223021
stepNP_001036375.2 Sec7 395..577 CDD:460178 72/186 (39%)
PH_GRP1-like 592..710 CDD:269954 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.

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