DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EED and escl

DIOPT Version :9

Sequence 1:NP_001294936.1 Gene:EED / 8726 HGNCID:3188 Length:466 Species:Homo sapiens
Sequence 2:NP_001285857.1 Gene:escl / 34611 FlyBaseID:FBgn0032391 Length:462 Species:Drosophila melanogaster


Alignment Length:501 Identity:245/501 - (48%)
Similarity:315/501 - (62%) Gaps:76/501 - (15%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSEREVSTAPAGTDMPAAKKQK---------LSSDENS-----NPD----LSGDENDDAVSIESG 47
            |:|...|.....::.|.|:.:.         ||::.:|     .||    ::..:.:|..|:.|.
  Fly     1 MTETNPSEISPPSEEPPAEDESTDHSPAEAVLSNNSSSVCNVVEPDDEHEVNSVDREDTASLFST 65

Human    48 TNTERPDTPTNTPN------------APGRKSWGKGKWKSKKCKYSFKCVNSLKEDHNQPLFGVQ 100
            |.|   .|.:.:||            ||        |......|||    :.::||||..:||||
  Fly    66 TTT---TTRSKSPNTRKLNRLCRRIKAP--------KMVQPLYKYS----SHVREDHNHQIFGVQ 115

Human   101 FNWHSKEGDPLVFATVGSNRVTLYEC-HSQGE-----IRLLQSYVDADADENFYTCAWTYDSNTS 159
            ||.....|.|.||||||.:||::||| .|.|:     |||||.|.|.|.||:||||||:|||.|.
  Fly   116 FNPFLDRGQPQVFATVGKDRVSIYECERSTGQESCEGIRLLQVYADPDTDESFYTCAWSYDSVTG 180

Human   160 HPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT 224
            .|:||.||.||:|||.||:..||.|:|:|||:|||||||||..|.||||.||||:|||||||:|.
  Fly   181 DPVLAAAGYRGVIRIFNPVKHQCSKNYIGHGHAINELKFHPTRPQLLLSGSKDHSLRLWNIQSDV 245

Human   225 LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPF 289
            .||:|||||||||||||.|:||.|::|||.||||||||||::...:..||:.|..::|||...||
  Fly   246 CVAVFGGVEGHRDEVLSVDFDLRGDRIMSSGMDHSLKLWRLDKPDIKEAIELSSGFSPNKNTGPF 310

Human   290 ISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSGRAILHSHQQCMRDPVSPNLRQHLSCENAIV 354
            .:.|.||||||||||||||||||:|.||.:.||                         ||||:||
  Fly   311 PTIKEHFPDFSTRDIHRNYVDCVQWFGDFVFSK-------------------------SCENSIV 350

Human   355 CWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVE 419
            ||||||:.:...:|||.||..|:|..|||..|:||::||:.:.|||:||||||:|..:||:|:..
  Fly   351 CWKPGKLSESWHEIKPQESATTVLHHFDYKMCEIWFVRFAFNAWQKILALGNQLGTTFVWELDCN 415

Human   420 DPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 465
            ||:..||:.|.|.|..:.|||||||:|.|||:.||||:::|||||:
  Fly   416 DPNLTKCSQLVHPKSNSTIRQTSFSKDGSILVCVCDDSTVWRWDRV 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EEDNP_001294936.1 WD40 repeat 96..140 CDD:293791 27/49 (55%)
WD40 repeat 148..188 CDD:293791 25/39 (64%)
WD40 150..463 CDD:421866 180/312 (58%)
WD40 repeat 193..230 CDD:293791 27/36 (75%)
WD40 repeat 240..302 CDD:293791 34/61 (56%)
WD40 repeat 309..382 CDD:293791 28/72 (39%)
WD40 repeat 390..430 CDD:293791 19/39 (49%)
WD40 repeat 438..462 CDD:293791 16/23 (70%)
esclNP_001285857.1 WD40 96..459 CDD:225201 221/391 (57%)
WD40 107..352 CDD:295369 158/269 (59%)
WD40 repeat 111..158 CDD:293791 25/46 (54%)
WD40 repeat 169..209 CDD:293791 25/39 (64%)
WD40 repeat 214..251 CDD:293791 27/36 (75%)
WD40 253..>459 CDD:295369 123/230 (53%)
WD40 repeat 261..323 CDD:293791 34/61 (56%)
WD40 repeat 330..378 CDD:293791 28/72 (39%)
WD40 repeat 386..426 CDD:293791 19/39 (49%)
WD40 repeat 434..458 CDD:293791 16/23 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141256
Domainoid 1 1.000 236 1.000 Domainoid score I2346
eggNOG 1 0.900 - - E1_KOG1034
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2814
Inparanoid 1 1.050 488 1.000 Inparanoid score I1435
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59795
OrthoDB 1 1.010 - - D1191277at2759
OrthoFinder 1 1.000 - - FOG0005723
OrthoInspector 1 1.000 - - otm41215
orthoMCL 1 0.900 - - OOG6_102885
Panther 1 1.100 - - LDO PTHR10253
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2640
SonicParanoid 1 1.000 - - X4715
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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