DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TRADD and Tradd

DIOPT Version :9

Sequence 1:NP_001310481.1 Gene:TRADD / 8717 HGNCID:12030 Length:312 Species:Homo sapiens
Sequence 2:NP_001028333.1 Gene:Tradd / 71609 MGIID:109200 Length:310 Species:Mus musculus


Alignment Length:312 Identity:239/312 - (76%)
Similarity:269/312 - (86%) Gaps:2/312 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAAGQNGHEEWVGSAYLFVESSLDKVVLSDAYAHPQQKVAVYRALQAALAESGGSPDVLQMLKIH 65
            ||||||||||||||||||:||::|||:||:||..|::|||:|:|||.||:|||.|.||||:||||
Mouse     1 MAAGQNGHEEWVGSAYLFLESAVDKVILSEAYTDPKKKVAIYKALQTALSESGDSSDVLQILKIH 65

Human    66 RSDPQLIVQLRFCGRQPCGRFLRAYREGALRAALQRSLAAALAQHSVPLQLELRAGAERLDALLA 130
            .||||||||||||||..|||||:||||||||.||||.:|.||||.::.||||||||||:||:.|.
Mouse    66 CSDPQLIVQLRFCGRVLCGRFLQAYREGALRTALQRCMAPALAQEALRLQLELRAGAEQLDSWLT 130

Human   131 DEERCLSCILAQQPDRLRDEELAELEDALRNLKCGSGARGGDGEVASAPLQPPVPSLSEVKPPPP 195
            ||||||:.||||:||||||||||||||.|..|.|....:||..:||||..:.||.|.:|.|  |.
Mouse   131 DEERCLNYILAQKPDRLRDEELAELEDELCKLTCDCTGQGGAIQVASAGSKFPVSSPTEEK--PL 193

Human   196 PPPAQTFLFQGQPVVNRPLSLKDQQTFARSVGLKWRKVGRSLQRGCRALRDPALDSLAYEYEREG 260
            |...|||||.||.||||||:|:||||||||||||||:|||||||.||||||||||||||||||:|
Mouse   194 PAACQTFLFHGQLVVNRPLTLQDQQTFARSVGLKWRRVGRSLQRNCRALRDPALDSLAYEYERDG 258

Human   261 LYEQAFQLLRRFVQAEGRRATLQRLVEALEENELTSLAEDLLGLTDPNGGLA 312
            ||||||||||||:||||||||||||||||||||||||||||||..:|:||||
Mouse   259 LYEQAFQLLRRFMQAEGRRATLQRLVEALEENELTSLAEDLLGQAEPDGGLA 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRADDNP_001310481.1 TRADD_N 51..160 CDD:401105 85/108 (79%)
Nuclear export signal. /evidence=ECO:0000250|UniProtKB:Q3U0V2 147..163 12/15 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..195 11/24 (46%)
DD 215..304 CDD:417479 82/88 (93%)
Interaction with KRT14 and KRT18. /evidence=ECO:0000269|PubMed:11684708 222..289 62/66 (94%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:Q3U0V2 231..244 10/12 (83%)
TraddNP_001028333.1 TRADD_N 51..148 CDD:286166 74/96 (77%)
Nuclear export signal. /evidence=ECO:0000269|PubMed:22561347 147..163 12/15 (80%)
Death_TRADD 213..301 CDD:260050 81/87 (93%)
Interaction with KRT14 and KRT18. /evidence=ECO:0000250|UniProtKB:Q15628 220..287 62/66 (94%)
Nuclear localization signal. /evidence=ECO:0000269|PubMed:22561347 229..242 10/12 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83961482
Domainoid 1 1.000 166 1.000 Domainoid score I30982
eggNOG 1 0.900 - - E1_29ZIY
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2807
Inparanoid 1 1.050 458 1.000 Inparanoid score I12854
Isobase 1 0.950 - 0 Normalized mean entropy S6982
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG38698
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0010978
OrthoInspector 1 1.000 - - oto118680
orthoMCL 1 0.900 - - OOG6_118853
Panther 1 1.100 - - LDO PTHR14913
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6357
SonicParanoid 1 1.000 - - X8537
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1919.240

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