DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment B3GALNT1 and brn

DIOPT Version :10

Sequence 1:NP_001336091.1 Gene:B3GALNT1 / 8706 HGNCID:918 Length:451 Species:Homo sapiens
Sequence 2:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster


Alignment Length:301 Identity:77/301 - (25%)
Similarity:135/301 - (44%) Gaps:56/301 - (18%)


- Green bases have known domain annotations that are detailed below.


Human   175 YEPIYRQDFHFTLREHSNCS-----------------------HQNPFLVILVTSHPSDVKARQA 216
            :|..:.:.||:.|.:.:...                       .|...|.:|:.|...:.:.|:|
  Fly    32 HELNFERHFHYPLNDDTGSGSASSGLDKFAYLRVPSFTAEVPVDQPARLTMLIKSAVGNSRRREA 96

Human   217 IRVTWGEKKSWWGYEVLTFFLLGQEAEKEDKMLALSLEDEHLLYGDIIRQDFLDTYNNLTLKTIM 281
            ||.|||.:..:....:...|||| .||..:|.:|....:    :|||::.:|.|.|.|.||||::
  Fly    97 IRRTWGYEGRFSDVHLRRVFLLG-TAEDSEKDVAWESRE----HGDILQAEFTDAYFNNTLKTML 156

Human   282 AFRWVTEFCPNAKYVMKTDTDVFINTGNLVKYL---LNLNHSEKFFTGYPLIDNYSYRGFYQKTH 343
            ..||.::....:::.:..|.|.:::..|::|:|   ...:..|..|.|: :......|..:.|.:
  Fly   157 GMRWASDQFNRSEFYLFVDDDYYVSAKNVLKFLGRGRQSHQPELLFAGH-VFQTSPLRHKFSKWY 220

Human   344 ISYQEYPFKVFPPYCSGLGYIMSRDLVPRIYEMMGHVKPIKFEDVYVGICLNLLKVNIHIPEDTN 408
            :|.:||||..:|||.:...:|:|:..:.::|....|:...:|:|||:||.  .||..|.:.    
  Fly   221 VSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLPLFRFDDVYLGIV--ALKAGISLQ---- 279

Human   409 LFFLYRIHLDVCQLRR-----------VIAAHGFSSKEIIT 438
                   |.|..:..|           |||:|.|...|.:|
  Fly   280 -------HCDDFRFHRPAYKGPDSYSSVIASHEFGDPEEMT 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
B3GALNT1NP_001336091.1 Galactosyl_T 212..405 CDD:426415 59/195 (30%)
brnNP_476901.1 Galactosyl_T 92..282 CDD:426415 60/208 (29%)

Return to query results.
Submit another query.