DRSC/TRiP Functional Genomics Resources

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Protein Alignment SRSF9 and SF2

DIOPT Version :10

Sequence 1:NP_003760.1 Gene:SRSF9 / 8683 HGNCID:10791 Length:221 Species:Homo sapiens
Sequence 2:NP_652611.1 Gene:SF2 / 53443 FlyBaseID:FBgn0283477 Length:255 Species:Drosophila melanogaster


Alignment Length:244 Identity:130/244 - (53%)
Similarity:160/244 - (65%) Gaps:36/244 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     9 GGEGDGRIYVGNLPTDVREKDLEDLFYKYGRIREIELKNRHGLVPFAFVRFEDPRDAEDAIYGRN 73
            |...:.||||||||.|:|.||::|||:|:|::..::||||.| .|||||.|||.|||:||:..|:
  Fly     2 GSRNECRIYVGNLPPDIRTKDIQDLFHKFGKVTFVDLKNRRG-PPFAFVEFEDARDADDAVKARD 65

Human    74 GYDYGQCRLRVEFPRTYGGRGGWPRGGRN-------------GPPTRRSDFRVLVSGLPPSGSWQ 125
            ||||...||||||||. ||.|.:..|.||             |||.:||.:||:|:|||.|||||
  Fly    66 GYDYDGYRLRVEFPRG-GGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQ 129

Human   126 DLKDHMREAGDVCYADVQKDGVGMVEYLRKEDMEYALRKLDDTKFRSHEGETSYIRVYP-----E 185
            |||||||||||||:||..|||.|:||:||.|||:||::||||::|||||||.:||||..     :
  Fly   130 DLKDHMREAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGDND 194

Human   186 RSTSYGYS---------------RSRSGSRGRDSPYQSRGSPHYFSPFR 219
            |....|.|               |.||.||...|..:.||:|.| ||.|
  Fly   195 RGGGGGGSGGGGGGSGGGGSRDYRDRSRSRSFSSRPRRRGTPTY-SPVR 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SRSF9NP_003760.1 RRM1_SRSF9 15..86 CDD:241042 44/70 (63%)
RRM2_SRSF9 104..186 CDD:410161 58/86 (67%)
Interaction with SAFB1 188..200 5/26 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..221 15/46 (33%)
SF2NP_652611.1 RRM_SF 3..80 CDD:473069 46/77 (60%)
RRM2_SRSF1_like 115..188 CDD:410013 54/72 (75%)

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