DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanA-14F and ppp6c

DIOPT Version :9

Sequence 1:NP_001245717.1 Gene:CanA-14F / 8674098 FlyBaseID:FBgn0267912 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_957299.1 Gene:ppp6c / 393980 ZFINID:ZDB-GENE-040426-949 Length:305 Species:Danio rerio


Alignment Length:302 Identity:119/302 - (39%)
Similarity:169/302 - (55%) Gaps:29/302 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 IEESAALRIIQEGATLLRTEKTMIDIEAPVTVCGDIHGQFYDLMKLFEIGGSPATTKYLFLGDYV 194
            :.|:...|:......||..|..:..:..|||||||||||||||.:||..||....|.|:|:||:|
Zfish    19 LPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFV 83

  Fly   195 DRGYFSIECVLYLWSLKITYPQTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFDC 258
            ||||:|:|...||.:||..:|..:.|||||||.|.:|:.:.|..||:.|| :...:..|...||.
Zfish    84 DRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCTKVFDM 148

  Fly   259 LPLAALMNQQFLCVHGGLSPEIHELEDIRRLDRFKEPPAFGPMCDLLWSDPLEDFGNEKNSDFYT 323
            |.:|||:::|.|||||||||:|..|:.||.::|.:|.|..|..|||:|||| ||.      |.:.
Zfish   149 LTVAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSDP-EDV------DTWA 206

  Fly   324 HNSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQDAGYR-MYRKSQTTGFPSLITIFSAPNYLD 387
             .|.||..:.:......:|:..|||..|.|||:....||: |:.:       .|:|::|||||..
Zfish   207 -ISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDE-------KLVTVWSAPNYCY 263

  Fly   388 VYNNKAAVLKYEN-NVMNIRQFNCSPH-----------PYWL 417
            ...|.|:::.::: |....:.|...|.           ||:|
Zfish   264 RCGNIASIMVFKDVNTREPKLFRAVPDSERVIPPRTTTPYFL 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanA-14FNP_001245717.1 MPP_PP2B 115..419 CDD:277361 119/302 (39%)
PP2Ac 132..403 CDD:197547 114/273 (42%)
ppp6cNP_957299.1 MPP_PP2A_PP4_PP6 5..289 CDD:277360 115/284 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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