DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanA-14F and gsp-2

DIOPT Version :9

Sequence 1:NP_001245717.1 Gene:CanA-14F / 8674098 FlyBaseID:FBgn0267912 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_001022616.1 Gene:gsp-2 / 3564807 WormBaseID:WBGene00001748 Length:333 Species:Caenorhabditis elegans


Alignment Length:319 Identity:116/319 - (36%)
Similarity:180/319 - (56%) Gaps:38/319 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 VFDARTGKPQHDVLKQHFILEGRIEESAALRIIQEGATLLRTEKTMIDIEAPVTVCGDIHGQFYD 171
            :.:.|..||..:|         ::.||....:.|:...:..::..::::|||:.:|||:|||:||
 Worm    15 LLEVRGSKPGKNV---------QLTESEIKGLCQKSREIFLSQPILLELEAPLKICGDVHGQYYD 70

  Fly   172 LMKLFEIGGSPATTKYLFLGDYVDRGYFSIECVLYLWSLKITYPQTLFLLRGNHECRHLTEYFTF 236
            |::|||.||.|..:.|||||||||||..|:|.:..|.:.||.||:..|||||||||..:...:.|
 Worm    71 LLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGF 135

  Fly   237 KQECKIKYSERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEIHELEDIRRLDRFKEPPAFGPM 301
            ..|||.:|:.:::....|.|:|||:||:::::..|.||||||::..:|.|||:.|..:.|..|.:
 Worm   136 YDECKRRYNIKLWKTFTDCFNCLPVAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLL 200

  Fly   302 CDLLWSDPLEDFGNEKNSDFYTHNSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQDAGYRMYR 366
            ||||||||.:|......:|       ||.|:.:.......||..::|..|.|||:..:.||..:.
 Worm   201 CDLLWSDPDKDVTGWGEND-------RGVSFTFGPEVVAKFLHKHDLDLICRAHQVVEDGYEFFA 258

  Fly   367 KSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVMNIRQFNCS----------PHPY 415
            |.|      |:|:||||||...::|..:::..:..:|      ||          .:||
 Worm   259 KRQ------LVTLFSAPNYCGEFDNAGSMMTVDETLM------CSFQILKPADKKKYPY 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanA-14FNP_001245717.1 MPP_PP2B 115..419 CDD:277361 114/311 (37%)
PP2Ac 132..403 CDD:197547 107/270 (40%)
gsp-2NP_001022616.1 PTZ00480 5..315 CDD:185658 116/319 (36%)
MPP_PP1_PPKL 7..297 CDD:277359 114/309 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.