DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanA-14F and Ppef1

DIOPT Version :9

Sequence 1:NP_001245717.1 Gene:CanA-14F / 8674098 FlyBaseID:FBgn0267912 Length:584 Species:Drosophila melanogaster
Sequence 2:XP_038955765.1 Gene:Ppef1 / 317498 RGDID:1562772 Length:664 Species:Rattus norvegicus


Alignment Length:600 Identity:129/600 - (21%)
Similarity:220/600 - (36%) Gaps:181/600 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QSQSAAQQQQQQNQKA-------NVNNTHDNKNAAATTGTAAGSGSGGAAGSAGTQQQGQGGTGT 71
            ||...|.:|.|....:       |..|||...:|..                             
  Rat    70 QSIEYADEQGQMQLSSFFSFMLENYTNTHKEDSALV----------------------------- 105

  Fly    72 SSGPSSPTKRSTISTKER--------VIDS-----VAFPPSRKLTCADVFDARTGKPQHDVLKQH 123
                |...:.:.:.:|:|        |.||     :.||    ||..|:........|...|..|
  Rat   106 ----SRLFENTRLESKDREEYVGLIDVPDSYDGPRLQFP----LTFTDINLLLQAFKQQQTLHAH 162

  Fly   124 FILEGRIEESAALRIIQEGATLLRTEKTMIDIEA----PVTVCGDIHGQFYDLMKLFEIGGSPA- 183
            ::||          ::.|...:|:.......|:.    .:|:|||:||:..|||.:|...|.|: 
  Rat   163 YVLE----------VLFEARKILKQMPNFTRIQTFPAKEITICGDLHGKLDDLMLIFYKNGLPSE 217

  Fly   184 TTKYLFLGDYVDRGYFSIECVLYLWSLKITYPQTLFLLRGNHECRHLTEYFTFKQECKIKY---S 245
            ...|:|.||:||||..|:|.::.|....:.||..|.|.|||||...:...:.|.:|...||   .
  Rat   218 KNPYVFNGDFVDRGNNSMEILMILLVSFLVYPTDLHLNRGNHEDFMMNLRYGFTKEILQKYKLHG 282

  Fly   246 ERVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEIHELEDIRRLDRFK-----EPP--------- 296
            :::.....:.:..||:..:::.:.|.:|||:| |..:|..:::|.|.|     .||         
  Rat   283 KKILQVLEELYTWLPIGTIIDNEILVIHGGIS-ESTDLNILQQLQRNKMKSVLMPPMSTNQECNI 346

  Fly   297 ---AFGP----------------MCDLLWSDPLEDFGNEKNSDFYTHNSVRGCSYFYSYAACCDF 342
               ..||                :.|||||||....|...|:.       ||...::........
  Rat   347 KKNKAGPSEQSASEQLTKLEWEQIIDLLWSDPRGKKGCYPNTS-------RGGGCYFGPDVTSKV 404

  Fly   343 LQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLK---------- 397
            |..|.|..:||:||.:..||.:....:      :||:|||.||.:..:|:.|.::          
  Rat   405 LNKNQLKMVIRSHECKPDGYEICHDGK------VITVFSASNYYEEGSNRGAYIRLSYGTSPQFF 463

  Fly   398 -------------YEN-NVMN------------------IRQFNCSPH--------PYWLPNFMD 422
                         |:. |.|.                  |..|....|        ..|..:...
  Rat   464 QYQVTSTSCLNPLYQRVNAMEFSAFRILKERMIARKTDLINAFELRDHSRTGKISLAQWAFSMES 528

  Fly   423 VFTWSLPFVGEKVTEMLVNVLNICSDDELMTEES---EEPLSDDEAALRKEVIRNKIRAIGKMAR 484
            :...:||:  ..::..||:..:..|.|.:.:.:.   |:|:.|    ::.::|....|....:..
  Rat   529 ILGLNLPW--RSLSSHLVSTDSSGSVDYMSSFDDIHIEKPMKD----MKSDLIETMYRYRSDLKI 587

  Fly   485 VFSVLREESESVLQL 499
            :|:::..:...::.:
  Rat   588 IFNIIDTDQSGLISM 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanA-14FNP_001245717.1 MPP_PP2B 115..419 CDD:277361 96/394 (24%)
PP2Ac 132..403 CDD:197547 86/335 (26%)
Ppef1XP_038955765.1 IQ 40..>57 CDD:197470
MPP_RdgC 140..466 CDD:277364 93/353 (26%)
PTZ00183 505..647 CDD:185503 15/103 (15%)
EF-hand_7 582..650 CDD:404394 1/20 (5%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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