DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CanA-14F and Ppp2cb

DIOPT Version :10

Sequence 1:NP_727985.2 Gene:CanA-14F / 8674098 FlyBaseID:FBgn0267912 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_058736.1 Gene:Ppp2cb / 24673 RGDID:3381 Length:309 Species:Rattus norvegicus


Alignment Length:286 Identity:120/286 - (41%)
Similarity:168/286 - (58%) Gaps:16/286 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 RIEESAALRIIQEGATLLRTEKTMIDIEAPVTVCGDIHGQFYDLMKLFEIGGSPATTKYLFLGDY 193
            ::.|:....:.::...:|..|..:.::..|||||||:||||:|||:||.|||....|.|||:|||
  Rat    22 QLNENQVRTLCEKAKEILTKESNVQEVRCPVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDY 86

  Fly   194 VDRGYFSIECVLYLWSLKITYPQTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMDAFD 257
            |||||:|:|.|..|.:||:.||:.:.:||||||.|.:|:.:.|..||..|| :..|:....|.||
  Rat    87 VDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFD 151

  Fly   258 CLPLAALMNQQFLCVHGGLSPEIHELEDIRRLDRFKEPPAFGPMCDLLWSDPLEDFGNEKNSDFY 322
            .|||.||::.|..|:||||||.|..|:.||.|||.:|.|..||||||||||| :|.|.       
  Rat   152 YLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDP-DDRGG------- 208

  Fly   323 THNSVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLD 387
            ...|.||..|.:.......|...|.|..:.|||:....||......      :::||||||||..
  Rat   209 WGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDR------NVVTIFSAPNYCY 267

  Fly   388 VYNNKAAVLKYENNV-MNIRQFNCSP 412
            ...|:||:::.::.: .:..||:.:|
  Rat   268 RCGNQAAIMELDDTLKYSFLQFDPAP 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanA-14FNP_727985.2 MPP_PP2B 115..419 CDD:277361 120/286 (42%)
Ppp2cbNP_058736.1 MPP_PP2A_PP4_PP6 9..293 CDD:277360 119/284 (42%)

Return to query results.
Submit another query.