DRSC/TRiP Functional Genomics Resources

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Protein Alignment CanA-14F and gsp-3

DIOPT Version :9

Sequence 1:NP_001245717.1 Gene:CanA-14F / 8674098 FlyBaseID:FBgn0267912 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_491429.1 Gene:gsp-3 / 172082 WormBaseID:WBGene00021113 Length:305 Species:Caenorhabditis elegans


Alignment Length:284 Identity:97/284 - (34%)
Similarity:157/284 - (55%) Gaps:24/284 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 GRIEESAALRIIQE----GATLLRTEKTMIDIEAPVTVCGDIHGQFYDLMKLFEIGGSPATTKYL 188
            ||:..|...:.:|.    ..::..::.:::::|.|:.||||||||:.||:::|:..|.|....:|
 Worm    22 GRLTTSVNEQELQTCCAVAKSVFASQASLLEVEPPIIVCGDIHGQYSDLLRIFDKNGFPPDVNFL 86

  Fly   189 FLGDYVDRGYFSIECVLYLWSLKITYPQTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDAC 252
            |||||||||..:||.:..:...||.||:..|:|||||||..:...:.|.:||..:| |.|::...
 Worm    87 FLGDYVDRGRQNIETICLMLCFKIKYPENFFMLRGNHECPAINRVYGFYEECNRRYKSTRLWSIF 151

  Fly   253 MDAFDCLPLAALMNQQFLCVHGGLSPEIHELEDIRRLDRFKEPPAFGPMCDLLWSDPLEDFGNEK 317
            .|.|:.:||..|:..:.||:||||||.:..|:.:|:|.|.::||......||||:||        
 Worm   152 QDTFNWMPLCGLIGSRILCMHGGLSPHLQTLDQLRQLPRPQDPPNPSIGIDLLWADP-------- 208

  Fly   318 NSDFYTHN---SVRGCSYFYSYAACCDFLQNNNLLSIIRAHEAQDAGYRMYRKSQTTGFPSLITI 379
              |.:...   :.||.||.:......|.....::..:.|||:....||..:...:      ::||
 Worm   209 --DQWVKGWQANTRGVSYVFGQDVVADVCSRLDIDLVARAHQVVQDGYEFFASKK------MVTI 265

  Fly   380 FSAPNYLDVYNNKAAVLKYENNVM 403
            ||||:|...::|.||.:|.:.|::
 Worm   266 FSAPHYCGQFDNSAATMKVDENMV 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CanA-14FNP_001245717.1 MPP_PP2B 115..419 CDD:277361 97/284 (34%)
PP2Ac 132..403 CDD:197547 95/278 (34%)
gsp-3NP_491429.1 MPP_superfamily 6..297 CDD:301300 97/284 (34%)
PP2Ac 29..299 CDD:197547 94/277 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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