DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and kcnk1b

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_001277277.1 Gene:kcnk1b / 561206 ZFINID:ZDB-GENE-090312-78 Length:337 Species:Danio rerio


Alignment Length:232 Identity:54/232 - (23%)
Similarity:85/232 - (36%) Gaps:90/232 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   589 GVAVGGGPPHEWN--FAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIPLTLVYLSSTG 651
            ||::.......||  |..:..::.|||:|.|||:.||.:..|:...:.|:..|||.||::|:   
Zfish    89 GVSILNNASASWNWDFTSSLFFASTVLSTTGYGHTAPLSDGGKAFCIIYSVIGIPFTLLFLT--- 150

  Fly   652 SILARVAREVFSKALCCCLCSNCGYCCYDEKRMAEKERRMRRKRQQEELRKQQAVMQEPYYVRDV 716
            :::.|:           .:.|......|...|..                     :.:|...  :
Zfish   151 AVVQRI-----------MVYSTWRPIMYVHTRWG---------------------LSKPLVA--L 181

  Fly   717 FHATPEKDAGAGAPPPNAGGPVGSVGGLGDIDSLSASESRGSMHGLSILAPILL-CFSMMIIYIV 780
            .|||                                           :||.:.: ||      .:
Zfish   182 VHAT-------------------------------------------LLAVVAVSCF------FL 197

  Fly   781 FGAAVLYRLEK-WPILDGIYFCFMSLSTIGFGDMLPG 816
            ..||:...||: |..|:..||||:||||||.||.:||
Zfish   198 IPAAIFSALEENWNFLESFYFCFISLSTIGLGDYVPG 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 20/58 (34%)
Ion_trans <601..640 CDD:278921 13/40 (33%)
Ion_trans_2 774..846 CDD:285168 20/44 (45%)
kcnk1bNP_001277277.1 Ion_trans_2 <99..157 CDD:285168 21/71 (30%)
Ion_trans_2 192..267 CDD:285168 22/49 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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