DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and galene

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_612084.1 Gene:galene / 38133 FlyBaseID:FBgn0035192 Length:729 Species:Drosophila melanogaster


Alignment Length:702 Identity:118/702 - (16%)
Similarity:196/702 - (27%) Gaps:383/702 - (54%)


- Green bases have known domain annotations that are detailed below.


  Fly   477 DTYDVRQRTIENIWDITVSLNILYKENWTKLAALEIAKFQDQLIKRLNEDVMLQLSHDDVANAPS 541
            |..::|....||||.::....:|.:.:|....:..:|.|:.|::..:..|               
  Fly    73 DIQNLRVNLTENIWLLSDDAVVLRESDWMANVSKHLANFEKQILTAIKAD--------------- 122

  Fly   542 SSSSSSSSSSSSSSSTGASGVPGSNNPATEAVLLHTHYHHHRAGGVGGVAVGGGPPHEWNFAKAF 606
                               |..|..:....                           :|.||.:.
  Fly   123 -------------------GWDGDEDLRKS---------------------------QWTFAGSL 141

  Fly   607 LYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIPLTLVYLSSTGSILARVAREVFSKALCCCLC 671
            .||:.|:||||||:::|||..|::.|:.||..||||.|:.||:.|.::|...|.::.: :||.:|
  Fly   142 FYSIIVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVMATSFRFLYWR-ICCYVC 205

  Fly   672 S------------------------------------------------NCGYCC---------- 678
            :                                                :.|:..          
  Fly   206 TRTAKRPRNARSRQRSMRSQRHARSQPPPSFRRSMKMTQRSGNDSGLGPSMGHAYSDPDLRTMGR 270

  Fly   679 -YDEKRMAE------KERRMR---------------------------------RKRQQEELRKQ 703
             ||::....      :.||.:                                 |:||::.:|.:
  Fly   271 GYDDREFGHRSSGGGRNRRQQQQQHLHHDPRQRHTIYGDGYETQTLNRSNRYSSRQRQRDRMRDR 335

  Fly   704 QAVMQEPY------------------------YVRDV-----------------FHATPEK---- 723
            ..|.:|.|                        .||.|                 .|:.|.:    
  Fly   336 HTVERERYSRSHLDAGSIEDFGDMQPPAKRAASVRSVRSPHNQESSKASRELHRLHSAPGRSRAK 400

  Fly   724 --------------------------------DAGAG---------------------------- 728
                                            |.|..                            
  Fly   401 SVDPRHVSSHYEDVDEDVVRKTPIIPNRYALDDFGGNRRQAAPRSQSMPRSAHQRQRQKDRERER 465

  Fly   729 --APPPNAG------GPVGSVG----------GLGDIDS----------------------LSAS 753
              .|||.:.      ...||:|          .|.|.|:                      :..|
  Fly   466 SPQPPPQSSYRQQHDRRAGSLGRQSSRYGNHLELPDYDAPPPGRDHRRDRRGHSQGRYEDYVEES 530

  Fly   754 ESRGSMHG-------------------------------------LSIL---------------- 765
            ...||::|                                     :|.:                
  Fly   531 FDEGSLYGDNNYEDYPPERHHSRSREPKRNRRRERAERLPPSPRIMSPMGFPVQRQIRRRPSYDY 595

  Fly   766 -----------------------APILLCFSMMIIYIVFGAAVLYRLEKWPILDGIYFCFMSLST 807
                                   .||.||..:::.||:.||.:....|.|..||..||||::|:|
  Fly   596 DDDDSMYGDEYGDYGDLLPKDRPVPIWLCVFLVVSYILGGAVLFAYWENWSFLDSAYFCFITLTT 660

  Fly   808 IGFGDMLP--GLRRESNATTWFCSVYIMSGMTLTAMCFNVIHEEIVHRIRIV 857
            |||||.:|  |::.||..:..:||:|::.|:.|.||.||::.||.:..::.|
  Fly   661 IGFGDFVPAKGVKDESEQSIAYCSLYLLFGIALLAMSFNLVQEEFIANVKEV 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 27/56 (48%)
Ion_trans <601..640 CDD:278921 18/38 (47%)
Ion_trans_2 774..846 CDD:285168 32/73 (44%)
galeneNP_612084.1 Ion_trans_2 <134..189 CDD:285168 27/54 (50%)
NESP55 341..586 CDD:115071 23/244 (9%)
Ion_trans <621..709 CDD:278921 37/87 (43%)
Ion_trans_2 626..706 CDD:285168 34/79 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461325
Domainoid 1 1.000 51 1.000 Domainoid score I4317
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm41373
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.950

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