DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and KCNK1

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_002236.1 Gene:KCNK1 / 3775 HGNCID:6272 Length:336 Species:Homo sapiens


Alignment Length:231 Identity:53/231 - (22%)
Similarity:83/231 - (35%) Gaps:88/231 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   589 GVAVGGGPPHEWN--FAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIPLTLVYLSSTG 651
            ||:|.......||  |..|..::.|||:|.|||:..|.:..|:...:.|:..|||.||::|:   
Human    89 GVSVLSNASGNWNWDFTSALFFASTVLSTTGYGHTVPLSDGGKAFCIIYSVIGIPFTLLFLT--- 150

  Fly   652 SILARVAREVFSKALCCCLCSNCGYCCYDEKRMAEKERRMRRKRQQEELRKQQAVMQEPYYVRDV 716
            :::.|:...|..:.:..                                          :::|..
Human   151 AVVQRITVHVTRRPVLY------------------------------------------FHIRWG 173

  Fly   717 FHATPEKDAGAGAPPPNAGGPVGSVGGLGDIDSLSASESRGSMHGLSILAPILLCFSMMIIYIVF 781
            |                                        |...::|:..:||.|..:..:...
Human   174 F----------------------------------------SKQVVAIVHAVLLGFVTVSCFFFI 198

  Fly   782 GAAVLYRLE-KWPILDGIYFCFMSLSTIGFGDMLPG 816
            .|||...|| .|..|:..||||:||||||.||.:||
Human   199 PAAVFSVLEDDWNFLESFYFCFISLSTIGLGDYVPG 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 20/58 (34%)
Ion_trans <601..640 CDD:278921 13/40 (33%)
Ion_trans_2 774..846 CDD:285168 21/44 (48%)
KCNK1NP_002236.1 Ion_trans_2 <101..157 CDD:400301 20/58 (34%)
pore-forming domain 107..123 8/15 (53%)
Ion_trans_2 192..267 CDD:400301 21/43 (49%)
pore-forming domain 212..238 15/23 (65%)
Important for intracellular retention in recycling endosomes. /evidence=ECO:0000269|PubMed:19959478 293..299
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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