DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and twk-48

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_001022681.1 Gene:twk-48 / 3565640 WormBaseID:WBGene00010784 Length:372 Species:Caenorhabditis elegans


Alignment Length:551 Identity:119/551 - (21%)
Similarity:187/551 - (33%) Gaps:233/551 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 TNLGICMLLLAYTLLGSFIFLTIENEDSALLHQQHTLASTKRNLAGLGIGAAGIGSSIYQQQQQQ 392
            :::|:|.|::.|.|||:.||..:|.                                        
 Worm    26 SHIGLCALVVGYALLGAVIFKAVEG---------------------------------------- 50

  Fly   393 QQQRTPHQQQQQHQAVQGRHADNDTMAAAAAAVAAQGTLAGSASAGGLNPFGQPASSGEFVYGLD 457
                 ||:.:.|.                         |..||                      
 Worm    51 -----PHEAEIQE-------------------------LVKSA---------------------- 63

  Fly   458 GMDATDLEAGGMPQFALSPDTYDVRQRTIENIWDITVSLNILYKENWTKLAALEIAKFQDQLIKR 522
                                    |::.::.:|:.|..:|.|..:.|.|....|        :||
 Worm    64 ------------------------REKAVDVVWNATFRVNRLDSKQWKKTVLDE--------VKR 96

  Fly   523 LNEDVMLQLSHDDVANAPSSSSSSSSSSSSSSSSTGASGVPGSNNPATEAVLLHTHYHHHRAGGV 587
            .....||.:                           ..|..|...                    
 Worm    97 FKTVCMLSI---------------------------RKGYDGKEY-------------------- 114

  Fly   588 GGVAVGGGPPHEWNFAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIPLTLVYLSSTGS 652
                   |...:|.|..||||||||:|||||||.|.:|.:|:.:|:.||..||||.|::|::.|.
 Worm   115 -------GKQAQWTFTGAFLYSLTVITTIGYGNTAAKTYIGKTLTMLYAIIGIPLMLLFLTNIGD 172

  Fly   653 ILARVAREVFSKALCCCLCSNCGYCCYDEKRMAEKERR----MRRKRQQEELRKQQAVMQEPYYV 713
            ::|::.|.::::::..    ......:.:||.|.|.||    :.|..:...::...:|       
 Worm   173 VMAKIFRFLYAQSIRL----KFRLILWHKKRKAAKIRRANSLVSRLTRGHRVKADSSV------- 226

  Fly   714 RDVFHATPEKDAGAGAPPPNAGGPVGSVGGLGDIDSLSASESRGSMHGL-----------SILAP 767
             |.|      ..||||                |::.|..  :|..|..|           |:..|
 Worm   227 -DSF------GLGAGA----------------DVEDLLT--ARVEMEQLEVRETAAAQLESMTVP 266

  Fly   768 ILLCFSMMIIYIVFGAAVLYRLEKWPILDGIYFCFMSLSTIGFGDMLPGL----RRESNATTWFC 828
            |.|....|:.|:..|..:....|.|..|:..||||:||:||||||..|..    ..|:.......
 Worm   267 ISLVVFTMLGYLGVGTTIFKVWEGWTFLESFYFCFISLTTIGFGDKFPSTSVSNTDEAQEKLVIT 331

  Fly   829 SVYIMSGMTLTAMCFNVIHEEIVHRIRIVVE 859
            |:|::.||.|.|||||:..||:.::.|.:.:
 Worm   332 SIYLLFGMALLAMCFNLAQEEVQNKTRWIAD 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 30/56 (54%)
Ion_trans <601..640 CDD:278921 22/38 (58%)
Ion_trans_2 774..846 CDD:285168 30/75 (40%)
twk-48NP_001022681.1 Ion_trans_2 <117..176 CDD:285168 30/58 (52%)
Ion_trans_2 272..355 CDD:285168 32/82 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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