DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42594 and twk-43

DIOPT Version :10

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_872137.2 Gene:twk-43 / 3565024 WormBaseID:WBGene00006693 Length:597 Species:Caenorhabditis elegans


Alignment Length:315 Identity:77/315 - (24%)
Similarity:128/315 - (40%) Gaps:76/315 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   599 EWNFAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIPLTLVYLSSTGSILARVAREVFS 663
            :|....|.|:..||:||||||||||::..||:..:.|...|||..::.:::.|..||.:.:....
 Worm   163 QWTTTDAILFCFTVITTIGYGNVAPQSFWGRVFVIIYGTIGIPTAMMAIANVGKFLATLLKSWTR 227

  Fly   664 KALCCCLCSNCGYCCYDEKRMAEKERRMRRKRQQ-EELRKQQAVMQ----EPYYVRDVFHATPEK 723
            ..|..|            ::|   ::||::|.|. .|:::.|.:|:    :...:.|        
 Worm   228 PFLLLC------------RKM---KKRMQKKDQNGNEIKETQRLMESSKKKAKKIED-------- 269

  Fly   724 DAGAGAPPPNAGGPVGSVGGLGDIDSLSASESRGSMHGLSILAPILLCFSMMIIYIVFGAAVL-Y 787
                                  ||.|....|:...:....:...|:| |...::||:.|:.:: |
 Worm   270 ----------------------DISSHEDEEAEEEVEESDVTETIVL-FVAFLVYIIAGSLLMSY 311

  Fly   788 RLEKWPILDGIYFCFMSLSTIGFGDMLPGLRRESNATTWF--CSVYIMSGMTLTAMCFNVIHEEI 850
            ..|.......|||.|::|:|||.||::|      .:|.|.  ..||...|:.||.:...:..:.:
 Worm   312 YEEGMTFGLAIYFNFVTLTTIGLGDLVP------QSTDWLFVTLVYCAIGLALTTIAIEIAADTL 370

  Fly   851 --VHRIRIVVEFKKTSAANSGGGLIGGGSVSGGAGGAGGSMMDVAHEEGGQYYVP 903
              :|..              |..|....:|....||...||..:....|.|..||
 Worm   371 KKLHYF--------------GRKLDNVQNVQIWFGGQKLSMKALVKNLGDQLNVP 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:462301 23/56 (41%)
Ion_trans_2 774..846 CDD:462301 23/74 (31%)
twk-43NP_872137.2 Ion_trans_2 155..218 CDD:462301 22/54 (41%)
Ion_trans_2 298..372 CDD:462301 23/79 (29%)

Return to query results.
Submit another query.