DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and twk-4

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_001343566.1 Gene:twk-4 / 192079 WormBaseID:WBGene00006659 Length:418 Species:Caenorhabditis elegans


Alignment Length:364 Identity:81/364 - (22%)
Similarity:124/364 - (34%) Gaps:146/364 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   597 PHE---WNFAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIPLTLVYLSSTGSILARVA 658
            |.|   |:...|..::.||||:|||||:.|.:|.|:|..:.||.||||||||.::          
 Worm   173 PQETSRWSMISAIFFTTTVLTSIGYGNLIPISTGGKIFCVGYAIFGIPLTLVTIA---------- 227

  Fly   659 REVFSKALCCCLCSNCGYCCYDEKRMAEKERRMRRKRQQEELRKQQAVMQEPYYVRDVFHATPEK 723
                                                    :|.|         :|.|:....|.:
 Worm   228 ----------------------------------------DLAK---------FVADMLIMDPTE 243

  Fly   724 DAGAGAPPPNAGGPVGSVGGLGDIDSLSASESRGSMHGLSILAPILLCFSMMIIYIVFGAAVLYR 788
            |...|..                                      ||....::.|:...|.|...
 Worm   244 DPKTGRQ--------------------------------------LLVLVFLLGYMTISACVYTI 270

  Fly   789 LE-KWPILDGIYFCFMSLSTIGFGDMLPGLRRESNATTWFCS-VYIMSGMTLTAMCFNV------ 845
            || .|..||..|||.:||.|:||||:.|    ........|| |:|..|:.||.:..:|      
 Worm   271 LEPMWSFLDSFYFCLVSLLTVGFGDLHP----VGTVEYMLCSIVFIFIGLILTTLAVDVSGSVGI 331

  Fly   846 --IHE--------EIVHRIRIVVEFKKTSAANSGGGLIGGGSVS-GGAGGAGGSMMD--VAHEEG 897
              :|.        ::::.:|:    :|:.       .:..|:|| ..|....|..:|  ..|:..
 Worm   332 AKMHSIGRGFDAMKMLNALRV----RKSE-------FVAKGAVSLSAAARVAGRRLDGQQPHQPR 385

  Fly   898 GQYYVPASX----HYEKRGHLYQRNPTEETLVTDTPTSL 932
            ...|||..     :.::..::..|.      .|.|.||:
 Worm   386 WFAYVPKDALTIPYIDESANVSSRT------TTTTHTSI 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 26/59 (44%)
Ion_trans <601..640 CDD:278921 17/38 (45%)
Ion_trans_2 774..846 CDD:285168 27/81 (33%)
twk-4NP_001343566.1 Ion_trans_2 <178..235 CDD:311712 28/115 (24%)
Ion_trans_2 255..329 CDD:311712 27/77 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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