DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and twk-25

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_502170.4 Gene:twk-25 / 192076 WormBaseID:WBGene00006678 Length:683 Species:Caenorhabditis elegans


Alignment Length:538 Identity:88/538 - (16%)
Similarity:148/538 - (27%) Gaps:279/538 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly   332 ICMLLLA--YTLLGSFIFLTIENEDSALLHQQHTLASTKRNLAGLGIGAAGIGSSIYQQQQQQQQ 394
            :|||||.  |||||:.:|.:||:.     |:..|:...||.|..:                    
 Worm   290 VCMLLLVLLYTLLGAALFFSIESR-----HEHETMHFHKRKLDRI-------------------- 329

  Fly   395 QRTPHQQQQQHQAVQGRHADNDTMAAAAAAVAAQGTLAGSASAGGLNPFGQPASSGEFVYGLDGM 459
                                                                             
 Worm   330 ----------------------------------------------------------------- 329

  Fly   460 DATDLEAGGMPQFALSPDTYDVRQRTIENIWDITVSLNILYKENWTKLAALEIAKFQDQLIKRLN 524
                              .|::.|         |:.|.:|.....|.:..:|             
 Worm   330 ------------------IYEIAQ---------TLELEVLDPMKLTNITQME------------- 354

  Fly   525 EDVMLQLSHDDVANAPSSSSSSSSSSSSSSSSTGASGVPGSNNPATEAVLLHTHYHHHRAGGVGG 589
              ..:..::..:.||....|.|                              |.|.|.....:  
 Worm   355 --YFITRAYVKLLNAEDLYSGS------------------------------TFYKHEDPKNL-- 385

  Fly   590 VAVGGGPPHEWNFAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIPLTLVYLSSTGSIL 654
                     :|.:..||.:|:.|.||.|||::||.::||:.:.:.|....:|||.|.:...|...
 Worm   386 ---------KWTYGSAFFFSMNVYTTTGYGSIAPSSSLGKALVIVYGLIFVPLTAVVIRDLGQWA 441

  Fly   655 ARVAREVFSKALCCCLCSNCGYCCYDEKRMAEKERRMRRKRQQEELRKQQAVMQEPYYVRDVFHA 719
            .....::::                   .:.:..||:|                           
 Worm   442 LLYLTKMYT-------------------ILIDSFRRVR--------------------------- 460

  Fly   720 TPEKDAGAGAPPPNAGGPVGSVGGLGDIDSLSASESRGSMHGLSILAPILLCFSMMIIYIVFGAA 784
                                     |.:|.|...|        .|..||....|:||:|::....
 Worm   461 -------------------------GFVDKLDEDE--------IITLPIKFSVSVMILYLLSATM 492

  Fly   785 VLYRLEK--WPILDGI------YFCFMSLSTIGFGDMLPGLRRESNATTWFCSVYIM--SGMTLT 839
            .::..::  .|...||      ||.|:|:||||.||::|      |..|:...:.||  .||.:.
 Worm   493 FIFEYDELSGPPDSGISFFHAFYFSFISMSTIGLGDVMP------NNVTFSPLITIMFFFGMPIL 551

  Fly   840 AMCFNVIHEEIVHRIRIV 857
                     ::|:|:..:
 Worm   552 ---------KVVNRVTYI 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 20/56 (36%)
Ion_trans <601..640 CDD:278921 14/38 (37%)
Ion_trans_2 774..846 CDD:285168 23/81 (28%)
twk-25NP_502170.4 Ion_trans_2 370..440 CDD:285168 25/110 (23%)
Ion_trans <482..555 CDD:278921 23/87 (26%)
Ion_trans_2 482..551 CDD:285168 23/74 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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