DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42594 and twk-7

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_498903.3 Gene:twk-7 / 192073 WormBaseID:WBGene00006662 Length:557 Species:Caenorhabditis elegans


Alignment Length:669 Identity:120/669 - (17%)
Similarity:212/669 - (31%) Gaps:277/669 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 SKEKKKSRKATSQTVWSAL-LTNLGICMLLLAYTLLGSFIFLTIENEDSALLHQQHTLASTKRNL 371
            ||::.:..:.|....::.| |.::.:.:|...||::|:.||.::|        |.|         
 Worm   143 SKDEDEEEEETGIRKFAKLVLPHVALVLLTCTYTVIGALIFYSVE--------QPH--------- 190

  Fly   372 AGLGIGAAGIGSSIYQQQQQQQQQRTPHQQQQQHQAVQGRHADNDTMAAAAAAVAAQGTLAGSAS 436
                           :|..::||.:..:.:|                                  
 Worm   191 ---------------EQMMKEQQLKLIYTRQ---------------------------------- 206

  Fly   437 AGGLNPFGQPASSGEFVYGLDGMDATDLEAGGMPQFALSPDTYDVRQRTIENIWDITVSLNILYK 501
                         .|||     .|...|.||                             |...:
 Worm   207 -------------NEFV-----DDLIRLAAG-----------------------------NETKR 224

  Fly   502 ENWTKLAALEIAKFQDQLIKRLNEDVMLQLSHDDVANAPSSSSSSSSSSSSSSSSTGASGVPGSN 566
            ..|..||...:....|||.....:   ..|:.::|                            ..
 Worm   225 YEWESLAERHMHNMSDQLFVAFEK---YFLTSNEV----------------------------KK 258

  Fly   567 NPATEAVLLHTHYHHHRAGGVGGVAVGGGPPHEWNFAKAFLYSLTVLTTIGYGNVAPRTTLGRIV 631
            |.|||.                           |.|:.:..:::||:|||||||..|.|.:|||.
 Worm   259 NAATET---------------------------WTFSSSIFFAVTVVTTIGYGNPVPVTNIGRIW 296

  Fly   632 TLAYAFFGIPLTLVYLSSTGSILARVAREVFSKALCCCLCSNCGYCCYDEKRMAEKERRMRRKRQ 696
            .:.::..|||||||.::..|..|:.....::...|                    |.:.:...|.
 Worm   297 CILFSLLGIPLTLVTIADLGKFLSEHLVWLYGNYL--------------------KLKYLILSRH 341

  Fly   697 QEELRKQQAVMQEPYYVRDVFHATPEKDAGAGAPPPNAGGPVGSVGGLGDIDSLSASESRGSMHG 761
            ::|.|:         :|.:..|                                    |.|..|.
 Worm   342 RKERRE---------HVCEHCH------------------------------------SHGMGHD 361

  Fly   762 LSI---LAPILLCFSMMIIYIVFGAAVLYRLEKWPILDGIYFCFMSLSTIGFGDMLPGLRRESNA 823
            ::|   ..|..|..:::|:|..||..::.:||.|......|:.|::::|:||||::|  ||:  .
 Worm   362 MNIEEKRIPAFLVLAILIVYTAFGGVLMSKLEPWSFFTSFYWSFITMTTVGFGDLMP--RRD--G 422

  Fly   824 TTWFCSVYIMSGMTLTAMCFNVIHEEIVHRIRIVVEFKKTSAANSGGGLIGGGSVSGGAGGAGGS 888
            ..:...:||:.|:.:|.||.:::..:.:.:|...  .:|...|.|...::||             
 Worm   423 YMYIILLYIILGLAITTMCIDLVGVQYIRKIHYF--GRKIQDARSALAVVGG------------- 472

  Fly   889 MMDVAHEEGGQYYVPASXHYEKRGHLYQRNPTEETLVTDTPTSLVLKDYVNHELVPILTMDPNGA 953
                       ..|..| .|........||.:.|..:.:..       ||:..::|.:..|....
 Worm   473 -----------KVVLVSELYANLMQKRARNMSREAFIVENL-------YVSKHIIPFIPTDIRCI 519

  Fly   954 RLAPTPAPAYTPANTSTGM 972
            |.....|.|.|.:.:|:.:
 Worm   520 RYIDQTADAATISTSSSAI 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 25/56 (45%)
Ion_trans <601..640 CDD:278921 15/38 (39%)
Ion_trans_2 774..846 CDD:285168 23/71 (32%)
twk-7NP_498903.3 Ion_trans_2 <263..321 CDD:285168 26/84 (31%)
Ion_trans <371..>418 CDD:278921 15/46 (33%)
Ion_trans_2 377..>422 CDD:285168 17/48 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.