DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42594 and twk-6

DIOPT Version :9

Sequence 1:NP_001162668.2 Gene:CG42594 / 8674091 FlyBaseID:FBgn0260971 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_497973.1 Gene:twk-6 / 192070 WormBaseID:WBGene00006661 Length:347 Species:Caenorhabditis elegans


Alignment Length:412 Identity:79/412 - (19%)
Similarity:143/412 - (34%) Gaps:138/412 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 VYGLDGMDATDLEAGGMPQFALSPDTYDVRQRTIENIWDITVSLNILYKENWTKLAALEIAKFQD 517
            :|..:|..:.|.:.||.....:||:|   ||...:|: ::.|.|:          ||:.:..|  
 Worm     1 MYTDEGEYSGDTDHGGSTMQKMSPNT---RQNFRQNV-NVVVCLS----------AAITLLVF-- 49

  Fly   518 QLIKRLNEDVMLQLSHDDVANAPSSSSSSSSSSSSSSSSTGASGVP--GSNNPATEAVLLHTHYH 580
                        .|....:.....:.:||.|.:.:|..|.....:|  |......::.|......
 Worm    50 ------------NLIGAGIFYLAETQNSSESLNENSEVSKCLHNLPIGGKITAEMKSKLGKCLTK 102

  Fly   581 HHRAGGVGGVAVGGGPPHEWNFAKAFLYSLTVLTTIGYGNVAPRTTLGRIVTLAYAFFGIPLTLV 645
            ..|..|               |.||..:|.|:.:|:|||::.|.:||||.:|:.|:...||:.:.
 Worm   103 SSRIDG---------------FGKAIFFSWTLYSTVGYGSLYPHSTLGRYLTIFYSLLMIPVFIA 152

  Fly   646 YLSSTGSILARVAREVFSKALCCCLCSNCGYCCYDEKRMAEKERRMRRKRQQEELRKQQAVMQEP 710
            :....|:.||.....|.::.                 |:|.|:...:..:..|........:|..
 Worm   153 FKFEFGTFLAHFLVVVSNRT-----------------RLAVKKAYYKLSQNPENAETPSNSLQHD 200

  Fly   711 YYVRDVFHATPEKDAGAGAPPPNAGGPVGSVGGLGDIDSLSASESRGSMHGLSILAPILLCFSMM 775
            |                                                  |..|:.:|||    
 Worm   201 Y--------------------------------------------------LIFLSSLLLC---- 211

  Fly   776 IIYIVFGAAVLYRLEKWPILDGIYFCFMSLSTIGFGDMLPGLRRESNATTWF---CSVYIMSGMT 837
            .|.::..:|:...:|....|..:||..:::..||.||::|      ....||   |.::::|   
 Worm   212 SISLLSSSALFSSIENISYLSSVYFGIITMFLIGIGDIVP------TNLVWFSGYCMLFLIS--- 267

  Fly   838 LTAMCFNVIHEEIVH----RIR 855
                  :|:..:|.:    |:|
 Worm   268 ------DVLSNQIFYFCQARVR 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42594NP_001162668.2 Ion_trans_2 <599..656 CDD:285168 20/56 (36%)
Ion_trans <601..640 CDD:278921 16/38 (42%)
Ion_trans_2 774..846 CDD:285168 15/74 (20%)
twk-6NP_497973.1 Ion_trans_2 <109..163 CDD:285168 20/53 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163821
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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